RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 C7orf72A4D263 438 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 TARM1B6A8C7 271 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 CFLARO15519 480 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 TBX18O95935 607 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 ZDHHC11BP0C7U3 371 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 LAMP2P13473 410 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 ZNF12P17014 697 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 HDCP19113 662 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 PSMB4P28070 264 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 EPHA3P29320 983 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 DPP6P42658 865 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 GALK1P51570 392 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 AIF1P55008 147 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 PKNOX1P55347 436 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 CRADDP78560 199 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 ZBTB17Q13105 803 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 TMED1Q13445 227 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 GK3PQ14409 553 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 UGP2Q16851 508 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 SPATS1Q496A3 300 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 HECTD3Q5T447 861 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 INTS11Q5TA45 600 aaKnown RBP11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 IL23RQ5VWK5 629 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 BSPRYQ5W0U4 402 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 BTBD8Q5XKL5 378 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 FAM45BPQ6NSW5 357 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 BHLHA9Q7RTU4 235 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 GPR141Q7Z602 305 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 PATL1Q86TB9 770 aaKnown RBP11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 ZNF567Q8N184 647 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 ZSCAN18Q8TBC5 510 aaPredicted RBP11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 FAM45AQ8TCE6 357 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 OVCA2Q8WZ82 227 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 ZUFSPQ96AP4 578 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 VPS39Q96JC1 886 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 FCRL3Q96P31 734 aaPredicted RBP11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 SLC22A12Q96S37 553 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 VAT1Q99536 393 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 TMEM79Q9BSE2 394 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 YTHDF1Q9BYJ9 559 aaKnown RBP11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 RNF38Q9H0F5 515 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 RHOJQ9H4E5 214 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 TRHDEQ9UKU6 1024 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 PCDHGA7Q9Y5G6 932 aa11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 COPG1Q9Y678 874 aaKnown RBP11.45□□□□□ -0.58
TSPAN1-201ENST00000372003 TRAV19A0A0A6YYK7 116 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 TLR5O60602 858 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 LTFP02788 710 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 CKMP06732 381 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 CHRNGP07510 517 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 BMP1P13497 986 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 AVPR1AP37288 418 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 ATP4BP51164 291 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 GALNT1Q10472 559 aaPredicted RBP11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 LRP8Q14114 963 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 CYTH1Q15438 398 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 NHSL2Q5HYW2 709 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 FAM78AQ5JUQ0 283 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 SAMD4BQ5PRF9 694 aaKnown RBP11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 KCTD11Q693B1 232 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 TRIM67Q6ZTA4 783 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 PIWIL4Q7Z3Z4 852 aaKnown RBP11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 KCNMB4Q86W47 210 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 ZNF354CQ86Y25 554 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 CMTM8Q8IZV2 173 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 KDM1BQ8NB78 822 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 USP13Q92995 863 aaPredicted RBP11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 BORCS5Q969J3 196 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 CCDC126Q96EE4 140 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 DOK1Q99704 481 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 TBC1D23Q9NUY8 699 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 SMPD4Q9NXE4 827 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 GDE1Q9NZC3 331 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 CD300AQ9UGN4 299 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 LIMD1Q9UGP4 676 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 WDR37Q9Y2I8 494 aa11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 MTCL1Q9Y4B5 1905 aaKnown RBP11.44□□□□□ -0.58
TSPAN1-201ENST00000372003 KANSL1LA0AUZ9 987 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 TRIM64BA6NI03 449 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 NEMP1O14524 444 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 COCHO43405 550 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 HTRA2O43464 458 aaPredicted RBP11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 MFSD11O43934 449 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 MBL2P11226 248 aaPredicted RBP11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 NCAM1P13591 858 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 GOT1P17174 413 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 MYF6P23409 242 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 DDX6P26196 483 aaKnown RBP eCLIP11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 VIPR2P41587 438 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 ZNF135P52742 658 aaPredicted RBP11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 PHEXP78562 749 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 ZNF829Q3KNS6 432 aaPredicted RBP11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 PDCD4Q53EL6 469 aaKnown RBP11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 C10orf120Q5SQS8 335 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 ITPRIPL1Q6GPH6 555 aa11.43□□□□□ -0.58
TSPAN1-201ENST00000372003 C8orf82Q6P1X6 216 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms