RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 TMCO1Q9UM00 188 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 MAGEA13PA6NCF6 341 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 SYCE1LA8MT33 242 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 PSMD12O00232 456 aaPredicted RBP13.11□□□□□ -0.31
ECM1-202ENST00000369047 CASQ2O14958 399 aaPredicted RBP13.11□□□□□ -0.31
ECM1-202ENST00000369047 KERAO60938 352 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 SKAP2O75563 359 aaPredicted RBP13.11□□□□□ -0.31
ECM1-202ENST00000369047 SRP72O76094 671 aaKnown RBP13.11□□□□□ -0.31
ECM1-202ENST00000369047 RHOBTB1O94844 696 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 PIRTP0C851 137 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 CDC25CP30307 473 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 PBX2P40425 430 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 RGRP47804 291 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 PSMD8P48556 350 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 ACADVLP49748 655 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 CLCN4P51793 760 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 RPL26P61254 145 aaKnown RBP13.11□□□□□ -0.31
ECM1-202ENST00000369047 AARS2Q5JTZ9 985 aaKnown RBP13.11□□□□□ -0.31
ECM1-202ENST00000369047 IZUMO2Q6UXV1 221 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 LARP4Q71RC2 724 aaKnown RBP eCLIP13.11□□□□□ -0.31
ECM1-202ENST00000369047 DLG3Q92796 817 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 USP13Q92995 863 aaPredicted RBP13.11□□□□□ -0.31
ECM1-202ENST00000369047 PPP2R3CQ969Q6 453 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 ATOH8Q96SQ7 321 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 VN1R3Q9BXE9 311 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 KLHL4Q9C0H6 718 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 RNF38Q9H0F5 515 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 SPO11Q9Y5K1 396 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 RAI2Q9Y5P3 530 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 H7C0S8 307 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 UBFD1O14562 309 aaKnown RBP13.11□□□□□ -0.31
ECM1-202ENST00000369047 SORBS2O94875 1100 aaKnown RBP13.11□□□□□ -0.31
ECM1-202ENST00000369047 CTNNB1P35222 781 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 PTK2BQ14289 1009 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 FASTKQ14296 549 aaKnown RBP13.11□□□□□ -0.31
ECM1-202ENST00000369047 UGT3A2Q3SY77 523 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 CXorf57Q6NSI4 855 aaKnown RBP13.11□□□□□ -0.31
ECM1-202ENST00000369047 KBTBD2Q8IY47 623 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 PTGR2Q8N8N7 351 aaPredicted RBP13.11□□□□□ -0.31
ECM1-202ENST00000369047 PNPLA1Q8N8W4 532 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 SHKBP1Q8TBC3 707 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 MICAL1Q8TDZ2 1067 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 SLC25A23Q9BV35 468 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 PSMD13Q9UNM6 376 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 FIS1Q9Y3D6 152 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 YIPF1Q9Y548 306 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 ACTL7AQ9Y615 435 aa13.11□□□□□ -0.31
ECM1-202ENST00000369047 UBA6A0AVT1 1052 aaPredicted RBP13.1□□□□□ -0.31
ECM1-202ENST00000369047 TYW5A2RUC4 315 aaKnown RBP13.1□□□□□ -0.31
ECM1-202ENST00000369047 C5orf67F2Z3F1 127 aa13.1□□□□□ -0.31
ECM1-202ENST00000369047 C1RP00736 705 aa13.1□□□□□ -0.31
ECM1-202ENST00000369047 PDHA1P08559 390 aa13.1□□□□□ -0.31
ECM1-202ENST00000369047 SNRPB2P08579 225 aaKnown RBP13.1□□□□□ -0.31
ECM1-202ENST00000369047 ENO3P13929 434 aaPredicted RBP13.1□□□□□ -0.31
ECM1-202ENST00000369047 MTHFD2P13995 350 aa13.1□□□□□ -0.31
ECM1-202ENST00000369047 BMPR1AP36894 532 aa13.1□□□□□ -0.31
ECM1-202ENST00000369047 ADARP55265 1226 aaKnown RBP13.1□□□□□ -0.31
ECM1-202ENST00000369047 RAB33AQ14088 237 aa13.1□□□□□ -0.31
ECM1-202ENST00000369047 FLOT2Q14254 428 aa13.1□□□□□ -0.31
ECM1-202ENST00000369047 NCEH1Q6PIU2 408 aa13.1□□□□□ -0.31
ECM1-202ENST00000369047 HACD2Q6Y1H2 254 aa13.1□□□□□ -0.31
ECM1-202ENST00000369047 RYBPQ8N488 228 aaPredicted RBP13.1□□□□□ -0.31
ECM1-202ENST00000369047 LPCAT1Q8NF37 534 aa13.1□□□□□ -0.31
ECM1-202ENST00000369047 GATA6Q92908 595 aa13.1□□□□□ -0.31
ECM1-202ENST00000369047 NSMCE3Q96MG7 304 aa13.1□□□□□ -0.31
ECM1-202ENST00000369047 C19orf43Q9BQ61 176 aa13.1□□□□□ -0.31
ECM1-202ENST00000369047 LMAN2LQ9H0V9 348 aa13.1□□□□□ -0.31
ECM1-202ENST00000369047 ZNF576Q9H609 170 aa13.1□□□□□ -0.31
ECM1-202ENST00000369047 TNFRSF12AQ9NP84 129 aa13.1□□□□□ -0.31
ECM1-202ENST00000369047 SCOCQ9UIL1 159 aa13.1□□□□□ -0.31
ECM1-202ENST00000369047 SARDHQ9UL12 918 aa13.1□□□□□ -0.31
ECM1-202ENST00000369047 OAS3Q9Y6K5 1087 aaKnown RBP13.1□□□□□ -0.31
ECM1-202ENST00000369047 BPTFQ12830 3046 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 H0Y626 953 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 H3BNX3 289 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 TRIM38O00635 465 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 STX7O15400 261 aaKnown RBP13.09□□□□□ -0.31
ECM1-202ENST00000369047 CFLARO15519 480 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 TSPAN3O60637 253 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 VPS4BO75351 444 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 VPS26AO75436 327 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 BCAS2O75934 225 aaPredicted RBP13.09□□□□□ -0.31
ECM1-202ENST00000369047 MYOGP15173 224 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 CD1EP15812 388 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 FMO4P31512 558 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 ERFP50548 548 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 SGSHP51688 502 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 THOP1P52888 689 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 EPHB3P54753 998 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 STX1BP61266 288 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 SH3BP2P78314 561 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 ARF5P84085 180 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 UBE3AQ05086 875 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 CDC16Q13042 620 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 CEACAM7Q14002 265 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 OR4D1Q15615 310 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 MMEL1Q495T6 779 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 PABPC1LQ4VXU2 614 aaKnown RBP13.09□□□□□ -0.31
ECM1-202ENST00000369047 TXNDC11Q6PKC3 985 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 PAQR3Q6TCH7 311 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms