RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 XPOTO43592 962 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 ATP2C2O75185 946 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 GCATO75600 419 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 RHOBTB1O94844 696 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 IFNB1P01574 187 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 URODP06132 367 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 MYL4P12829 197 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 CD19P15391 556 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 MIPP30301 263 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 RPA3P35244 121 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 PTGER3P43115 390 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 PTPN9P43378 593 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 GLUD2P49448 558 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 AIF1P55008 147 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 MLLT6P55198 1093 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 GPX6P59796 221 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 OGDHQ02218 1023 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 TLE3Q04726 772 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 MBTD1Q05BQ5 628 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 FRG1Q14331 258 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 KCNJ11Q14654 390 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 PON2Q15165 354 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 PTPN20Q4JDL3 420 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 DGKKQ5KSL6 1271 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 ANKRD20A3Q5VUR7 823 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 FOXB2Q5VYV0 432 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 LMBRD2Q68DH5 695 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 SLC9A4Q6AI14 798 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 KYAT3Q6YP21 454 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 TRMT1LQ7Z2T5 733 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 TMEM110Q86TL2 294 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 ZNF410Q86VK4 478 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 LRRC6Q86X45 466 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 RFX6Q8HWS3 928 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 RHPN2Q8IUC4 686 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 CDKL3Q8IVW4 592 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 LZTR1Q8N653 840 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 LRRC52Q8N7C0 313 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 LINC01465Q8N7H1 131 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 FBXO36Q8NEA4 188 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 TTC8Q8TAM2 541 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 GDAP1Q8TB36 358 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 USP33Q8TEY7 942 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 MZB1Q8WU39 189 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 DCAKDQ8WVC6 231 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 STON2Q8WXE9 905 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 PIGKQ92643 395 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 FAF2Q96CS3 445 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 ERP27Q96DN0 273 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 WBP1Q96G27 269 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 NSL1Q96IY1 281 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 EXOC2Q96KP1 924 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 RNF157Q96PX1 679 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 PAFAH2Q99487 392 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 CLSTN3Q9BQT9 956 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 TMEM121Q9BTD3 319 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 TRMT61BQ9BVS5 477 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 TSSK1BQ9BXA7 367 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 RNF32Q9H0A6 362 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 C1orf21Q9H246 121 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 RNPEPL1Q9HAU8 725 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 FBRSL1Q9HCM7 1045 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 EIF2B3Q9NR50 452 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 MRGBPQ9NV56 204 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 GDE1Q9NZC3 331 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 AGAP1Q9UPQ3 857 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 LRRC42Q9Y546 428 aa6.55□□□□□ -1.36
ECHDC1-202ENST00000368289 HELZP42694 1942 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 SF3B1O75533 1304 aaKnown RBP eCLIP6.54□□□□□ -1.368e-6■■■■■ 107
ECHDC1-202ENST00000368289 A0A1B0GTL3 188 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 C2CD4BA6NLJ0 364 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 SPECC1L-ADORA2AF8WAN1 911 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 INO80B-WBP1J3KQ70 363 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 APOL1O14791 398 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 MAGEC1O60732 1142 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 SNUPNO95149 360 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 C22orf31O95567 290 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 MPOP05164 745 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 SRGAP2CP0DJJ0 459 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 CREB1P16220 341 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 AXLP30530 894 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 SDC4P31431 198 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 FDFT1P37268 417 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 PNPLA4P41247 253 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 IL12RB1P42701 662 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 ETV4P43268 484 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 RPL34P49207 117 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 CLCN2P51788 898 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 NEK3P51956 506 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 ARFIP2P53365 341 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 KCNJ2P63252 427 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 SLC6A3Q01959 620 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 MVKQ03426 396 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 ILF2Q12905 390 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 LSAMPQ13449 338 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 LRRC32Q14392 662 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 KRT81Q14533 505 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 TMEM132DQ14C87 1099 aa6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 PRKD1Q15139 912 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-202ENST00000368289 INSCQ1MX18 579 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms