RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 HNRNPABQ99729 332 aaKnown RBP13.86□□□□□ -0.19
COL6A1-201ENST00000361866 DHRS4Q9BTZ2 278 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 ZYG11BQ9C0D3 744 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 AMBNQ9NP70 447 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 ARL15Q9NXU5 204 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 UBA2Q9UBT2 640 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-201ENST00000361866 CDC14AQ9UNH5 594 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 TREHO43280 583 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 NPHS1O60500 1241 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 RECQL5O94762 991 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-201ENST00000361866 SOX6P35712 828 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 CAPGP40121 348 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 CLCNKBP51801 687 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 ANKRD46Q86W74 232 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 OR6K2Q8NGY2 324 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 PNPT1Q8TCS8 783 aaKnown RBP13.86□□□□□ -0.19
COL6A1-201ENST00000361866 ADAM2Q99965 735 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 MLPHQ9BV36 600 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-201ENST00000361866 REEP1Q9H902 201 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 IFT80Q9P2H3 777 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-201ENST00000361866 FBXW11Q9UKB1 542 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 DUSP12Q9UNI6 340 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 SAMHD1Q9Y3Z3 626 aaKnown RBP13.86□□□□□ -0.19
COL6A1-201ENST00000361866 NRCAMQ92823 1304 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 TSC22D2O75157 780 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 MLYCDO95822 493 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 FAM171A1Q5VUB5 890 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 CLEC20AQ6ZU45 233 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 MARVELD2Q8N4S9 558 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 NKAPQ8N5F7 415 aaKnown RBP13.85□□□□□ -0.19
COL6A1-201ENST00000361866 HEMK1Q9Y5R4 338 aaPredicted RBP13.85□□□□□ -0.19
COL6A1-201ENST00000361866 BBIP1A8MTZ0 92 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 F8W810 466 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 RGS14O43566 566 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 CTPS1P17812 591 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 PTPRCAPQ14761 206 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 ACAP2Q15057 778 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 SVOPQ8N4V2 548 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 PCDH12Q9NPG4 1184 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 TBC1D30Q9Y2I9 924 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 CAB39Q9Y376 341 aaPredicted RBP13.85□□□□□ -0.19
COL6A1-201ENST00000361866 PTGDR2Q9Y5Y4 395 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 TJP1Q07157 1748 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 BHMG1C9JSJ3 638 aaPredicted RBP13.85□□□□□ -0.19
COL6A1-201ENST00000361866 PRRG1O14668 218 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 ARPC2O15144 300 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 ZNF7P17097 686 aaPredicted RBP13.85□□□□□ -0.19
COL6A1-201ENST00000361866 ZNF135P52742 658 aaPredicted RBP13.85□□□□□ -0.19
COL6A1-201ENST00000361866 ZBED5Q49AG3 693 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 ZCCHC8Q6NZY4 707 aaKnown RBP13.85□□□□□ -0.19
COL6A1-201ENST00000361866 PSMG2Q969U7 264 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 REXO5Q96IC2 774 aaKnown RBP13.85□□□□□ -0.19
COL6A1-201ENST00000361866 TINF2Q9BSI4 451 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 ST3GAL5Q9UNP4 418 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 PDZK1P1A8MUH7 402 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 LSM1O15116 133 aaKnown RBP13.85□□□□□ -0.19
COL6A1-201ENST00000361866 AXLP30530 894 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 CMPK2Q5EBM0 449 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 CCNYL2Q5T2Q4 361 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 TSTD2Q5T7W7 516 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 TMEM132CQ8N3T6 1108 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 TOP6BLQ8N6T0 577 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 MCFD2Q8NI22 146 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 UBASH3BQ8TF42 649 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 SNX27Q96L92 541 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 EIF2B4Q9UI10 523 aaKnown RBP13.85□□□□□ -0.19
COL6A1-201ENST00000361866 TEKT2Q9UIF3 430 aa13.85□□□□□ -0.19
COL6A1-201ENST00000361866 TFECO14948 347 aaPredicted RBP13.84□□□□□ -0.19
COL6A1-201ENST00000361866 CYP2C18P33260 490 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 CDK9P50750 372 aaKnown RBP13.84□□□□□ -0.19
COL6A1-201ENST00000361866 CLDN10P78369 228 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 OR13C4Q8NGS5 318 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 TAMM41Q96BW9 452 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 CAMKK2Q96RR4 588 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 KCTD3Q9Y597 815 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 TRIM43BA6NCK2 446 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 SDHDO14521 159 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 TRIM24O15164 1050 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 CYBBP04839 570 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 GPIP06744 558 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 HOXD10P28358 340 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 PBLDP30039 288 aaPredicted RBP13.84□□□□□ -0.19
COL6A1-201ENST00000361866 LCP2Q13094 533 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 ZNF846Q147U1 533 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 TRIP4Q15650 581 aaPredicted RBP13.84□□□□□ -0.19
COL6A1-201ENST00000361866 OGFRL1Q5TC84 451 aaPredicted RBP13.84□□□□□ -0.19
COL6A1-201ENST00000361866 TTC23LQ6PF05 361 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 HIPK1Q86Z02 1210 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 LRRC58Q96CX6 371 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 WDR83Q9BRX9 315 aaKnown RBP13.84□□□□□ -0.19
COL6A1-201ENST00000361866 FBXO44Q9H4M3 255 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 ASB8Q9H765 288 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 CNTN3Q9P232 1028 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 PCDHB9Q9Y5E1 797 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 PPP2R3BQ9Y5P8 575 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 A0A1W2PQH9 124 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 ANGPTL1O95841 491 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 GOT2P00505 430 aaKnown RBP13.84□□□□□ -0.19
COL6A1-201ENST00000361866 HLA-DQB2P05538 268 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 EFNA1P20827 205 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms