RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 KLHDC9Q8NEP7 349 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 FBXL8Q96CD0 374 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 SLC30A3Q99726 388 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 HAUS8Q9BT25 410 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 UPF3AQ9H1J1 476 aaKnown RBP10.55□□□□□ -0.72
SMC3-201ENST00000361804 ABI2Q9NYB9 513 aaPredicted RBP10.55□□□□□ -0.72
SMC3-201ENST00000361804 ACVRL1P37023 503 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 LHX1P48742 406 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 MERTKQ12866 999 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 C18orf21Q32NC0 220 aaPredicted RBP10.55□□□□□ -0.72
SMC3-201ENST00000361804 TIGD2Q4W5G0 525 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 LDLRAP1Q5SW96 308 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 GPR141Q7Z602 305 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 ADGRG5Q8IZF4 528 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 VPS50Q96JG6 964 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 POLR1BQ9H9Y6 1135 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 CDC7O00311 574 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 CD1DP15813 335 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 AIF1P55008 147 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 MAP2K5Q13163 448 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 ACAP2Q15057 778 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 RPS6KA2Q15349 733 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 PHYKPLQ8IUZ5 450 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 TRIB2Q92519 343 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 GABRQQ9UN88 632 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 PDE4DIPQ5VU43 2346 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 CCDC162PA2VCL2 907 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 SUPT3HB4E1H0 165 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 ACOX3O15254 700 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 CLASP2O75122 1294 aaKnown RBP10.54□□□□□ -0.72
SMC3-201ENST00000361804 KCNH1O95259 989 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 EEF1DP29692 281 aaKnown RBP10.54□□□□□ -0.72
SMC3-201ENST00000361804 GGT5P36269 586 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 ARL1P40616 181 aaPredicted RBP10.54□□□□□ -0.72
SMC3-201ENST00000361804 PSMD8P48556 350 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 MBTPS1Q14703 1052 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 UPP1Q16831 310 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 TCTN1Q2MV58 587 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 TRIM71Q2Q1W2 868 aaKnown RBP10.54□□□□□ -0.72
SMC3-201ENST00000361804 AARS2Q5JTZ9 985 aaKnown RBP10.54□□□□□ -0.72
SMC3-201ENST00000361804 LYSMD3Q7Z3D4 306 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 ERI1Q8IV48 349 aaKnown RBP10.54□□□□□ -0.72
SMC3-201ENST00000361804 HS3ST5Q8IZT8 346 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 CFAP52Q8N1V2 620 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 IGSF8Q969P0 613 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 LRRC58Q96CX6 371 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 NSMCE3Q96MG7 304 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 GPATCH1Q9BRR8 931 aaKnown RBP10.54□□□□□ -0.72
SMC3-201ENST00000361804 VPS45Q9NRW7 570 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 CCM2LQ9NUG4 571 aaPredicted RBP10.54□□□□□ -0.72
SMC3-201ENST00000361804 UTS2RQ9UKP6 389 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 CDH9Q9ULB4 789 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 MUC3AQ02505 3323 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 CLOCKO15516 846 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 LDB2O43679 373 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 FMO4P31512 558 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 GSK3BP49841 420 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 HK2P52789 917 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 CRYBB1P53674 252 aaPredicted RBP10.54□□□□□ -0.72
SMC3-201ENST00000361804 HERVK_113P63132 956 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 CREB5Q02930 508 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 MAPRE2Q15555 327 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 TSNQ15631 228 aaKnown RBP10.54□□□□□ -0.72
SMC3-201ENST00000361804 MANEALQ5VSG8 457 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 FAM45BPQ6NSW5 357 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 FAM45AQ8TCE6 357 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 ERVK-6Q9BXR3 956 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 ARMC7Q9H6L4 198 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 AGPAT4Q9NRZ5 378 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 EXD2Q9NVH0 621 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 CNOT11Q9UKZ1 510 aaKnown RBP10.54□□□□□ -0.72
SMC3-201ENST00000361804 GIPC1O14908 333 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 AZIN1O14977 448 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 ADAMTS4O75173 837 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 IGLV3-25P01717 112 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 RBP1P09455 135 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 CYBAP13498 195 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 NAA20P61599 178 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 NFYCQ13952 458 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 SELPLGQ14242 412 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 RAB39AQ14964 217 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 RAP1GAP2Q684P5 730 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 PAQR3Q6TCH7 311 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 RTL3Q8N8U3 475 aaKnown RBP10.54□□□□□ -0.72
SMC3-201ENST00000361804 ANKFN1Q8N957 763 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 UHRF1Q96T88 793 aaPredicted RBP10.54□□□□□ -0.72
SMC3-201ENST00000361804 NPLQ9BXD5 320 aaPredicted RBP10.54□□□□□ -0.72
SMC3-201ENST00000361804 PAIP1Q9H074 479 aaKnown RBP10.54□□□□□ -0.72
SMC3-201ENST00000361804 CXorf21Q9HAI6 301 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 SP110Q9HB58 689 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 ZNF225Q9UK10 706 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 NDUFAF1Q9Y375 327 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 CFAP54Q96N23 3096 aa10.54□□□□□ -0.72
SMC3-201ENST00000361804 SCAMP3O14828 347 aaKnown RBP10.53□□□□□ -0.72
SMC3-201ENST00000361804 AXIN1O15169 862 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 MAN1A2O60476 641 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 BMP2P12643 396 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 TCF3P15923 654 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 ZNF182P17025 639 aaPredicted RBP10.53□□□□□ -0.72
SMC3-201ENST00000361804 CLCN5P51795 746 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms