RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.74□□□□□ -0.85
CHD3-202ENST00000358181 ADGRA3Q8IWK6 1321 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 PIP5K1CO60331 668 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 SPAG6O75602 509 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 ICAM1P05362 532 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 CYP3A4P08684 503 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 TIE1P35590 1138 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 C1QBPQ07021 282 aaKnown RBP9.74□□□□□ -0.85
CHD3-202ENST00000358181 SLC18A3Q16572 532 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 UBAP2Q5T6F2 1119 aaKnown RBP9.74□□□□□ -0.85
CHD3-202ENST00000358181 GALNT13Q8IUC8 556 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 CNTD1Q8N815 330 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 PSMA8Q8TAA3 256 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 FRS2Q8WU20 508 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 POF1BQ8WVV4 589 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 KLRF1Q9NZS2 232 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 STARD13Q9Y3M8 1113 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 UNC13BO14795 1591 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 GLUD1P00367 558 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 FCGR1AP12314 374 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 RARGP13631 454 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 AKR1A1P14550 325 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 LHCGRP22888 699 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 CDH5P33151 784 aaPredicted RBP9.74□□□□□ -0.85
CHD3-202ENST00000358181 NFE2Q16621 373 aaPredicted RBP9.74□□□□□ -0.85
CHD3-202ENST00000358181 TBRG1Q3YBR2 411 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 SLC9A9Q8IVB4 645 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 CFAP52Q8N1V2 620 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 STARD8Q92502 1023 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 KCNJ9Q92806 393 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 UBE2E3Q969T4 207 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 BPIFA3Q9BQP9 254 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 GANQ9H2C0 597 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 FZD3Q9NPG1 666 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 CRTAC1Q9NQ79 661 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 BATF3Q9NR55 127 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 PCDHB2Q9Y5E7 798 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 TRPV2Q9Y5S1 764 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 GPR75-ASB3A0A0A6YYF3 556 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 DPPA5A6NC42 116 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 M0R036 132 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 LDLRP01130 860 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 SRGNP10124 158 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 PRKAR1AP10644 381 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 COILP38432 576 aaPredicted RBP9.74□□□□□ -0.85
CHD3-202ENST00000358181 BACE1P56817 501 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 CXCL9Q07325 125 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 RIPK1Q13546 671 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 NAB2Q15742 525 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 ODF4Q2M2E3 257 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 ATAT1Q5SQI0 421 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 N4BP2L1Q5TBK1 243 aaPredicted RBP9.74□□□□□ -0.85
CHD3-202ENST00000358181 GALNT5Q7Z7M9 940 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 TMEM156Q8N614 296 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 FBXO22Q8NEZ5 403 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 MYCBPAPQ8TBZ2 947 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 TBX5Q99593 518 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 GMPPBQ9Y5P6 360 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 DIP2AQ14689 1571 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 ZNF536O15090 1300 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 TFECO14948 347 aaPredicted RBP9.74□□□□□ -0.85
CHD3-202ENST00000358181 STATHP02808 62 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 ERCC1P07992 297 aaPredicted RBP9.74□□□□□ -0.85
CHD3-202ENST00000358181 NEK3P51956 506 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 GRB10Q13322 594 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 COL9A2Q14055 689 aaPredicted RBP9.74□□□□□ -0.85
CHD3-202ENST00000358181 PERM1Q5SV97 790 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 ATPAF1Q5TC12 328 aaPredicted RBP9.74□□□□□ -0.85
CHD3-202ENST00000358181 TEX19Q8NA77 164 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 NPLOC4Q8TAT6 608 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 LRRN4Q8WUT4 740 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 SIPA1Q96FS4 1042 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 TMEM27Q9HBJ8 222 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 GPN1Q9HCN4 374 aaPredicted RBP9.74□□□□□ -0.85
CHD3-202ENST00000358181 SPATA31A6Q5VVP1 1343 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 HAT1O14929 419 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 GJB6O95452 261 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 CSH1P0DML2 217 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 CSH2P0DML3 217 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 MSLNQ13421 630 aaPredicted RBP9.74□□□□□ -0.85
CHD3-202ENST00000358181 PCBP2Q15366 365 aaKnown RBP eCLIP9.74□□□□□ -0.851e-8■■■■■ 32.3
CHD3-202ENST00000358181 SERPINB11Q96P15 392 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 FRMD8P1Q9BZ68 369 aaPredicted RBP9.74□□□□□ -0.85
CHD3-202ENST00000358181 SLC5A7Q9GZV3 580 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 CENPMQ9NSP4 180 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 NRCAMQ92823 1304 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 CLOCKO15516 846 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 NARSO43776 548 aaKnown RBP9.73□□□□□ -0.85
CHD3-202ENST00000358181 BRINP1O60477 761 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 PEX11AO75192 247 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 METTL18O95568 372 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 ADCYAP1R1P41586 468 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 SEC24CP53992 1094 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 ERVK-24P63145 666 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 ACVR2BQ13705 512 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 HKDC1Q2TB90 917 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 CHST15Q7LFX5 561 aaPredicted RBP9.73□□□□□ -0.85
CHD3-202ENST00000358181 TSTD1Q8NFU3 115 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 NLGN4YQ8NFZ3 816 aaPredicted RBP9.73□□□□□ -0.85
CHD3-202ENST00000358181 PRCCQ92733 491 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms