RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 EIF3KQ9UBQ5 218 aaKnown RBP12.82□□□□□ -0.36
SMC4-202ENST00000357388 HMGXB4Q9UGU5 601 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 ZNF99A8MXY4 864 aaPredicted RBP12.82□□□□□ -0.36
SMC4-202ENST00000357388 RSL1D1O76021 490 aaKnown RBP12.82□□□□□ -0.36
SMC4-202ENST00000357388 ADH1AP07327 375 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 CYP4B1P13584 511 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 CES1P23141 567 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 PSMB4P28070 264 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 PPM1AP35813 382 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 BRSK2Q8IWQ3 736 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 DEFB106AQ8N104 65 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 MKL1Q969V6 931 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 RERGQ96A58 199 aaPredicted RBP12.82□□□□□ -0.36
SMC4-202ENST00000357388 ZNF354BQ96LW1 612 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 PGLYRP2Q96PD5 576 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 CEP41Q9BYV8 373 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 ZDHHC6Q9H6R6 413 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 SNX15Q9NRS6 342 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 IQCMA0A1B0GVH7 501 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 DNTTP04053 509 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 EPHA3P29320 983 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 C6orf52Q5T4I8 152 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 WDR59Q6PJI9 974 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 GPC2Q8N158 579 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 FIBCD1Q8N539 461 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 OR52K1Q8NGK4 314 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 OR4A15Q8NGL6 344 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 KCTD4Q8WVF5 259 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 UNC93B1Q9H1C4 597 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 CD320Q9NPF0 282 aa12.82□□□□□ -0.36
SMC4-202ENST00000357388 TRIM3O75382 744 aaPredicted RBP12.81□□□□□ -0.36
SMC4-202ENST00000357388 NOS2P35228 1153 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 RORCP51449 518 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 CCSAPQ6IQ19 270 aaPredicted RBP12.81□□□□□ -0.36
SMC4-202ENST00000357388 BBS12Q6ZW61 710 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 DENND6BQ8NEG7 585 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 ZNF285Q96NJ3 590 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 CHMP1AQ9HD42 196 aaPredicted RBP12.81□□□□□ -0.36
SMC4-202ENST00000357388 PPIEQ9UNP9 301 aaKnown RBP12.81□□□□□ -0.36
SMC4-202ENST00000357388 PCDHGB3Q9Y5G1 929 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 FRMPD4Q14CM0 1322 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 FSCN2O14926 492 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 PRH1P02810 166 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 SLC5A3P53794 718 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 PTPRNQ16849 979 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 SLC9A6Q92581 669 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 TMEM109Q9BVC6 243 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 TAS2R1Q9NYW7 299 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 OR10H1Q9Y4A9 318 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 IQSEC2Q5JU85 1478 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 FABP12A6NFH5 140 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 ADAMDEC1O15204 470 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 KELP23276 732 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 ZNF143P52747 638 aaPredicted RBP12.81□□□□□ -0.36
SMC4-202ENST00000357388 LIPEQ05469 1076 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 TOP1MTQ969P6 601 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 RSPH9Q9H1X1 276 aaPredicted RBP12.81□□□□□ -0.36
SMC4-202ENST00000357388 SEMA3GQ9NS98 782 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 TRAF6Q9Y4K3 522 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 KCNK1O00180 336 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 PPEF2O14830 753 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 SERPINA3P01011 423 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 FGBP02675 491 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 MAP1SQ66K74 1059 aaPredicted RBP12.81□□□□□ -0.36
SMC4-202ENST00000357388 KCTD8Q6ZWB6 473 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 UTS2BQ765I0 119 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 C9orf43Q8TAL5 461 aaPredicted RBP12.81□□□□□ -0.36
SMC4-202ENST00000357388 CIB1Q99828 191 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 ADAM2Q99965 735 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 RHBGQ9H310 441 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 C3orf14Q9HBI5 128 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 FBXO6Q9NRD1 293 aaPredicted RBP12.81□□□□□ -0.36
SMC4-202ENST00000357388 DNAAF2Q9NVR5 837 aaKnown RBP12.81□□□□□ -0.36
SMC4-202ENST00000357388 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.81□□□□□ -0.363e-7■■□□□ 12.9
SMC4-202ENST00000357388 RCOR3Q9P2K3 495 aaPredicted RBP12.81□□□□□ -0.36
SMC4-202ENST00000357388 DNMT3LQ9UJW3 386 aa12.81□□□□□ -0.36
SMC4-202ENST00000357388 TRIM64CA6NLI5 447 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 OR2AT4A6NND4 320 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 OR10H2O60403 315 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 CTNNB1P35222 781 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 RTP1P59025 263 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 DEFA5Q01523 94 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 RHEBQ15382 184 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 LY6KQ17RY6 165 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 USP41Q3LFD5 358 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 SERPINA13PQ6UXR4 307 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 C3orf67Q6ZVT6 689 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 RBM15BQ8NDT2 890 aaKnown RBP12.8□□□□□ -0.36
SMC4-202ENST00000357388 WNT8BQ93098 351 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 PPCDCQ96CD2 204 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 FCRL4Q96PJ5 515 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 ACAT2Q9BWD1 397 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 CCSER2Q9H7U1 834 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 GRHL1Q9NZI5 618 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 SUCOQ9UBS9 1254 aaKnown RBP12.8□□□□□ -0.36
SMC4-202ENST00000357388 SLC27A6Q9Y2P4 619 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 LRRC7Q96NW7 1537 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 UROSP10746 265 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 PRKAG1P54619 331 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 OCLNQ16625 522 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms