RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 MAXP61244 160 aa11.72□□□□□ -0.53
COL9A1-202ENST00000357250 AP1S1P61966 158 aa11.72□□□□□ -0.53
COL9A1-202ENST00000357250 CPSF6Q16630 551 aaKnown RBP eCLIP11.72□□□□□ -0.53
COL9A1-202ENST00000357250 MPP5Q8N3R9 675 aa11.72□□□□□ -0.53
COL9A1-202ENST00000357250 C2orf15Q8WU43 125 aaKnown RBP11.72□□□□□ -0.53
COL9A1-202ENST00000357250 UNC93B1Q9H1C4 597 aa11.72□□□□□ -0.53
COL9A1-202ENST00000357250 ARHGEF4Q9NR80 690 aa11.72□□□□□ -0.53
COL9A1-202ENST00000357250 ZNF624Q9P2J8 865 aaPredicted RBP11.72□□□□□ -0.53
COL9A1-202ENST00000357250 MRPS33Q9Y291 106 aaKnown RBP11.72□□□□□ -0.53
COL9A1-202ENST00000357250 C2CD4BA6NLJ0 364 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 PER2O15055 1255 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 ASLP04424 464 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 SLC18A1P54219 525 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 GBE1Q04446 702 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 LCP2Q13094 533 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 USP4Q13107 963 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 KLHL12Q53G59 568 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 KLHL17Q6TDP4 642 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 ECHDC2Q86YB7 292 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 GJD3Q8N144 294 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 DQX1Q8TE96 717 aaKnown RBP11.71□□□□□ -0.53
COL9A1-202ENST00000357250 AHCYL2Q96HN2 611 aaKnown RBP11.71□□□□□ -0.53
COL9A1-202ENST00000357250 FNDC11Q9BVV2 318 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 SEMA3GQ9NS98 782 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 SPATA2Q9UM82 520 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 SOWAHBA6NEL2 793 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 PLK4O00444 970 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 SLC7A4O43246 635 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 MGRN1O60291 552 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 TSPAN1O60635 241 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 TULP3O75386 442 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 PIGRP01833 764 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 LINC00032P0C843 101 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 SLC1A5Q15758 541 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 MAPK11Q15759 364 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 TIGD2Q4W5G0 525 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 UBE2R2Q712K3 238 aaPredicted RBP11.71□□□□□ -0.53
COL9A1-202ENST00000357250 SLC47A1Q96FL8 570 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 MECRQ9BV79 373 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 TMPRSS4Q9NRS4 437 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 EXD2Q9NVH0 621 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 STXBP5LQ9Y2K9 1186 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 PCDHGB3Q9Y5G1 929 aa11.71□□□□□ -0.53
COL9A1-202ENST00000357250 LOC100506127A0A0U1RQW1 187 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 RCVRNP35243 200 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 SLC26A3P40879 764 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 KIR3DL1P43629 444 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 ELP6Q0PNE2 266 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 ITGADQ13349 1161 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 CPTPQ5TA50 214 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 PDPRQ8NCN5 879 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 PCDH12Q9NPG4 1184 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 AASDHPPTQ9NRN7 309 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 FNIP2Q9P278 1114 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 HMGXB4Q9UGU5 601 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 CHKBQ9Y259 395 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 STK16O75716 305 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 NUDT14O95848 222 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 FGBP02675 491 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 CAPGP40121 348 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 GLUD2P49448 558 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 CDH4P55283 916 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 BNC1Q01954 994 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 LAPTM5Q13571 262 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 QPCTQ16769 361 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 FAM182AQ5T1J6 154 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 EFCAB3Q8N7B9 438 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 GSTCDQ8NEC7 633 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 TEX47Q8TBZ9 253 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 BORCS5Q969J3 196 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 LRTM1Q9HBL6 345 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 XPNPEP1Q9NQW7 623 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 SSR3Q9UNL2 185 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 SCN11AQ9UI33 1791 aa11.71□□□□□ -0.54
COL9A1-202ENST00000357250 RPTORQ8N122 1335 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 GLYATL1P3A0A0U1RQE8 302 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 GSAPA4D1B5 854 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 E9PAM4 449 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 SIN3BO75182 1162 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 SCELO95171 688 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 PTX3P26022 381 aaPredicted RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 SPAM1P38567 509 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 CSNK2BP67870 215 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 GALNT3Q14435 633 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 NR1D2Q14995 579 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 DAW1Q8N136 415 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 CAMKK1Q8N5S9 505 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 RBM15BQ8NDT2 890 aaKnown RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 PIK3C3Q8NEB9 887 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 EEF1AKMT1Q8WVE0 214 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 RERGQ96A58 199 aaPredicted RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 S100A13Q99584 98 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 RBM4BQ9BQ04 359 aaKnown RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 CORO1BQ9BR76 489 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 RBM4Q9BWF3 364 aaKnown RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 EPB41L1Q9H4G0 881 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 NOL6Q9H6R4 1146 aaKnown RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 BPIFA1Q9NP55 256 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 ARHGEF3Q9NR81 526 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 CDH22Q9UJ99 828 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms