RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 TBC1D21Q8IYX1 336 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 GLB1L3Q8NCI6 653 aaPredicted RBP15.69■□□□□ 0.1
RTN3-205ENST00000356000 C7orf57Q8NEG2 295 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 OR7D4Q8NG98 312 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 DEDD2Q8WXF8 326 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 ISL2Q96A47 359 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 RTP4Q96DX8 246 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 UCK2Q9BZX2 261 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 IL22Q9GZX6 179 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 SMOC2Q9H3U7 446 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 GGA1Q9UJY5 639 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 TMPRSS11EQ9UL52 423 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 IPPQ9Y573 584 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 PCDHGB6Q9Y5F9 930 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 PSAT1Q9Y617 370 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 AUP1Q9Y679 476 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 C6orf229H3BNL8 230 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 NME4O00746 187 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 SDHDO14521 159 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 TSPAN4O14817 238 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 SERPINI2O75830 405 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 CALB1P05937 261 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 THRBP10828 461 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 ALDH3A2P51648 485 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 NKX3-2P78367 333 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 TAP1Q03518 808 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 SQLEQ14534 574 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 AOC3Q16853 763 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 BCL7AQ4VC05 210 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 COL13A1Q5TAT6 717 aaPredicted RBP15.69■□□□□ 0.1
RTN3-205ENST00000356000 ARSKQ6UWY0 536 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 NPNTQ6UXI9 565 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 TMEM151BQ8IW70 566 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 ANKRD49Q8WVL7 239 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 P2RX7Q99572 595 aaKnown RBP15.69■□□□□ 0.1
RTN3-205ENST00000356000 SLC25A23Q9BV35 468 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 TRMT6Q9UJA5 497 aaKnown RBP15.69■□□□□ 0.1
RTN3-205ENST00000356000 PCDHGB3Q9Y5G1 929 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 PCDHGA10Q9Y5H3 936 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 NAV1Q8NEY1 1877 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 LINC00862A6NCI5 91 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 PPEF1O14829 653 aaPredicted RBP15.68■□□□□ 0.1
RTN3-205ENST00000356000 IFNA16P05015 189 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 HSD17B1P14061 328 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 GNA15P30679 374 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 KRT20P35900 424 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 ARSFP54793 590 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 COX10Q12887 443 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 CTU2Q2VPK5 515 aaKnown RBP15.68■□□□□ 0.1
RTN3-205ENST00000356000 TPRG1LQ5T0D9 272 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 TTC23Q5W5X9 447 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 NIM1KQ8IY84 436 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 ARFGAP1Q8N6T3 406 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 FLCNQ8NFG4 579 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 BCL7CQ8WUZ0 217 aaPredicted RBP15.68■□□□□ 0.1
RTN3-205ENST00000356000 ZHX1-C8orf76Q96EF9 292 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 ZNF578Q96N58 590 aaPredicted RBP15.68■□□□□ 0.1
RTN3-205ENST00000356000 EHD3Q9NZN3 535 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 CCDC167Q9P0B6 97 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 ABCD2Q9UBJ2 740 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 EGFL7Q9UHF1 273 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 BTBD3Q9Y2F9 522 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 SLC1A7O00341 560 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 PAHP00439 452 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 ACADMP11310 421 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 ACO1P21399 889 aaKnown RBP15.68■□□□□ 0.1
RTN3-205ENST00000356000 AGXTP21549 392 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 GRIA4P48058 902 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 POLR2GP62487 172 aaKnown RBP eCLIP15.68■□□□□ 0.1
RTN3-205ENST00000356000 TRAF3Q13114 568 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 EFR3AQ14156 821 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 LRRC26Q2I0M4 334 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 SYT6Q5T7P8 510 aaPredicted RBP15.68■□□□□ 0.1
RTN3-205ENST00000356000 CMC1Q7Z7K0 106 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 MFSD3Q96ES6 412 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 AURKBQ96GD4 344 aaPredicted RBP15.68■□□□□ 0.1
RTN3-205ENST00000356000 BDH2Q9BUT1 245 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 DNAI2Q9GZS0 605 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 CCDC90BQ9GZT6 254 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 NUAK2Q9H093 628 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 GMEB2Q9UKD1 530 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 SNX6Q9UNH7 406 aa15.68■□□□□ 0.1
RTN3-205ENST00000356000 DDX60LQ5H9U9 1706 aaKnown RBP15.68■□□□□ 0.1
RTN3-205ENST00000356000 MEIOCA2RUB1 952 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 MEIS2O14770 477 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 PLD2O14939 933 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 TGFB3P10600 412 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 ZNF30P17039 623 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 CYP3A5P20815 502 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 TGM2P21980 687 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 LIG4P49917 911 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 IL1RL1Q01638 556 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 TNK1Q13470 666 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 DAG1Q14118 895 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 PON2Q15165 354 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 CA9Q16790 459 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 CYP51A1Q16850 503 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 LIPMQ5VYY2 423 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 ZNF600Q6ZNG1 722 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 ROPN1LQ96C74 230 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms