RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 MFRPQ9BY79 579 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 LIMA1Q9UHB6 759 aaKnown RBP15.77■□□□□ 0.12
DDX55-202ENST00000354291 NEU3Q9UQ49 428 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 SIK3Q9Y2K2 1263 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 EPHB6O15197 1021 aa15.76■□□□□ 0.11
DDX55-202ENST00000354291 KIAA0754O94854 1291 aa15.76■□□□□ 0.11
DDX55-202ENST00000354291 CHRNB2P17787 502 aa15.76■□□□□ 0.11
DDX55-202ENST00000354291 GRNP28799 593 aaKnown RBP15.76■□□□□ 0.11
DDX55-202ENST00000354291 EPHB2P29323 1055 aa15.76■□□□□ 0.11
DDX55-202ENST00000354291 FASLGP48023 281 aa15.76■□□□□ 0.11
DDX55-202ENST00000354291 POLR2LP62875 67 aaKnown RBP15.76■□□□□ 0.11
DDX55-202ENST00000354291 CDK3Q00526 305 aa15.76■□□□□ 0.11
DDX55-202ENST00000354291 CHAF1BQ13112 559 aa15.76■□□□□ 0.11
DDX55-202ENST00000354291 NAA30Q147X3 362 aaPredicted RBP15.76■□□□□ 0.11
DDX55-202ENST00000354291 SYCP1Q15431 976 aa15.76■□□□□ 0.11
DDX55-202ENST00000354291 RASGRP3Q8IV61 690 aa15.76■□□□□ 0.11
DDX55-202ENST00000354291 METTL5Q9NRN9 209 aaKnown RBP15.76■□□□□ 0.11
DDX55-202ENST00000354291 SLC5A6Q9Y289 635 aa15.76■□□□□ 0.11
DDX55-202ENST00000354291 TMEM98Q9Y2Y6 226 aa15.76■□□□□ 0.11
DDX55-202ENST00000354291 LGALS16A8MUM7 142 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 J3KR12 359 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 MBD3O95983 291 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 IVLP07476 585 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 PRF1P14222 555 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 SDC4P31431 198 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 NSFP46459 744 aaKnown RBP15.75■□□□□ 0.11
DDX55-202ENST00000354291 RGRP47804 291 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 YBEYP58557 167 aaPredicted RBP15.75■□□□□ 0.11
DDX55-202ENST00000354291 HHEXQ03014 270 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 UBXN1Q04323 297 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 BCL2L1Q07817 233 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 CPZQ66K79 652 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 MARK2Q7KZI7 788 aaKnown RBP15.75■□□□□ 0.11
DDX55-202ENST00000354291 PYROXD2Q8N2H3 581 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 SFRP1Q8N474 314 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 CCDC185Q8N715 623 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 RTL3Q8N8U3 475 aaKnown RBP15.75■□□□□ 0.11
DDX55-202ENST00000354291 TTC13Q8NBP0 860 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 SLC30A5Q8TAD4 765 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 RXFP2Q8WXD0 754 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 C19orf60Q96EN9 201 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 COQ10AQ96MF6 247 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 OR2M4Q96R27 311 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 B4GALT6Q9UBX8 382 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 PADI1Q9ULC6 663 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 SLC17A4Q9Y2C5 497 aa15.75■□□□□ 0.11
DDX55-202ENST00000354291 ARHGAP10A1A4S6 786 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 KRT86O43790 486 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 NDUFA10O95299 355 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 EML2O95834 649 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 KRT3P12035 628 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 UNGP13051 313 aaPredicted RBP15.74■□□□□ 0.11
DDX55-202ENST00000354291 PTPN9P43378 593 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 DNASE1L3Q13609 305 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 NR6A1Q15406 480 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 PARP15Q460N3 678 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 CCDC14Q49A88 953 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.74■□□□□ 0.11
DDX55-202ENST00000354291 RAET1GQ6H3X3 334 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 JMJD6Q6NYC1 403 aaPredicted RBP15.74■□□□□ 0.11
DDX55-202ENST00000354291 STRADAQ7RTN6 431 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 SLC34A3Q8N130 599 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 TSEN2Q8NCE0 465 aaKnown RBP15.74■□□□□ 0.11
DDX55-202ENST00000354291 MARVELD3Q96A59 401 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 OR6C1Q96RD1 312 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 ERGIC2Q96RQ1 377 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 C11orf70Q9BRQ4 267 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 ACSS2Q9NR19 701 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 ADAM22Q9P0K1 906 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 LNPEPQ9UIQ6 1025 aa15.74■□□□□ 0.11
DDX55-202ENST00000354291 ARGFXA6NJG6 315 aa15.73■□□□□ 0.11
DDX55-202ENST00000354291 C2CD4BA6NLJ0 364 aa15.73■□□□□ 0.11
DDX55-202ENST00000354291 LRCH4O75427 683 aa15.73■□□□□ 0.11
DDX55-202ENST00000354291 CALB1P05937 261 aa15.73■□□□□ 0.11
DDX55-202ENST00000354291 CCDC172P0C7W6 258 aa15.73■□□□□ 0.11
DDX55-202ENST00000354291 ETV3P41162 512 aa15.73■□□□□ 0.11
DDX55-202ENST00000354291 LEPRP48357 1165 aaKnown RBP15.73■□□□□ 0.11
DDX55-202ENST00000354291 SEPHS1P49903 392 aa15.73■□□□□ 0.11
DDX55-202ENST00000354291 GSCP56915 257 aaPredicted RBP15.73■□□□□ 0.11
DDX55-202ENST00000354291 SH3BP2P78314 561 aa15.73■□□□□ 0.11
DDX55-202ENST00000354291 CCDC183Q5T5S1 534 aa15.73■□□□□ 0.11
DDX55-202ENST00000354291 FNIP1Q8TF40 1166 aa15.73■□□□□ 0.11
DDX55-202ENST00000354291 CT55Q8WUE5 264 aa15.73■□□□□ 0.11
DDX55-202ENST00000354291 ECHDC3Q96DC8 303 aa15.73■□□□□ 0.11
DDX55-202ENST00000354291 PCDHB18PQ96TA0 734 aa15.73■□□□□ 0.11
DDX55-202ENST00000354291 SELENOOQ9BVL4 669 aa15.73■□□□□ 0.11
DDX55-202ENST00000354291 STN1Q9H668 368 aaKnown RBP15.73■□□□□ 0.11
DDX55-202ENST00000354291 SIDT1Q9NXL6 827 aaKnown RBP15.73■□□□□ 0.11
DDX55-202ENST00000354291 ZNF451Q9Y4E5 1061 aa15.73■□□□□ 0.11
DDX55-202ENST00000354291 PCDHGA9Q9Y5G4 932 aaKnown RBP15.73■□□□□ 0.11
DDX55-202ENST00000354291 PCDHGA6Q9Y5G7 932 aa15.73■□□□□ 0.11
DDX55-202ENST00000354291 HNRNPRO43390 633 aaKnown RBP15.72■□□□□ 0.11
DDX55-202ENST00000354291 CREB3O43889 395 aa15.72■□□□□ 0.11
DDX55-202ENST00000354291 PALMO75781 387 aa15.72■□□□□ 0.11
DDX55-202ENST00000354291 RECKO95980 971 aa15.72■□□□□ 0.11
DDX55-202ENST00000354291 VARSP26640 1264 aaKnown RBP15.72■□□□□ 0.11
DDX55-202ENST00000354291 CSNK1DP48730 415 aa15.72■□□□□ 0.11
DDX55-202ENST00000354291 PTP4A2Q12974 167 aa15.72■□□□□ 0.11
DDX55-202ENST00000354291 CNGA3Q16281 694 aa15.72■□□□□ 0.11
DDX55-202ENST00000354291 CLEC16AQ2KHT3 1053 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms