RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 EID2BQ96D98 161 aa13.22□□□□□ -0.29
CLCC1-202ENST00000348264 NAF1Q96HR8 494 aaKnown RBP13.22□□□□□ -0.29
CLCC1-202ENST00000348264 COX14Q96I36 57 aa13.22□□□□□ -0.29
CLCC1-202ENST00000348264 OR2M4Q96R27 311 aa13.22□□□□□ -0.29
CLCC1-202ENST00000348264 ANP32EQ9BTT0 268 aa13.22□□□□□ -0.29
CLCC1-202ENST00000348264 FOXP3Q9BZS1 431 aa13.22□□□□□ -0.29
CLCC1-202ENST00000348264 LRRN3Q9H3W5 708 aa13.22□□□□□ -0.29
CLCC1-202ENST00000348264 LRIT1Q9P2V4 623 aa13.22□□□□□ -0.29
CLCC1-202ENST00000348264 APPL1Q9UKG1 709 aa13.22□□□□□ -0.29
CLCC1-202ENST00000348264 ATXN7L1Q9ULK2 861 aaPredicted RBP13.22□□□□□ -0.29
CLCC1-202ENST00000348264 PCDHA13Q9Y5I0 950 aa13.22□□□□□ -0.29
CLCC1-202ENST00000348264 PCYT1BQ9Y5K3 369 aaPredicted RBP13.22□□□□□ -0.29
CLCC1-202ENST00000348264 OAS3Q9Y6K5 1087 aaKnown RBP13.22□□□□□ -0.29
CLCC1-202ENST00000348264 hCG_1818297A0A087WSY0 165 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 CCDC187A0A096LP49 1063 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 RCCD1A6NED2 376 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 SOWAHDA6NJG2 315 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 FADS2P1A8MWK0 482 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 NUDT21O43809 227 aaKnown RBP13.21□□□□□ -0.29
CLCC1-202ENST00000348264 CST8O60676 142 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 MT-CYBP00156 380 aaPredicted RBP13.21□□□□□ -0.29
CLCC1-202ENST00000348264 FGF1P05230 155 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 PYGLP06737 847 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 PIRTP0C851 137 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 PTPN3P26045 913 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 SPINT3P49223 89 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 ERVPABLB-1P60509 514 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 TLE3Q04726 772 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 PCSK7Q16549 785 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 PYCR3Q53H96 274 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 C11orf63Q6NUN7 778 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 FOXR1Q6PIV2 292 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 TMPRSS9Q7Z410 1059 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 KDELC2Q7Z4H8 507 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 NT5DC3Q86UY8 548 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 C17orf82Q86X59 251 aaPredicted RBP13.21□□□□□ -0.29
CLCC1-202ENST00000348264 RAVER1Q8IY67 606 aaKnown RBP13.21□□□□□ -0.29
CLCC1-202ENST00000348264 KATNAL2Q8IYT4 538 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 ZNF248Q8NDW4 579 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 SPATA22Q8NHS9 363 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 WDR36Q8NI36 951 aaKnown RBP13.21□□□□□ -0.29
CLCC1-202ENST00000348264 ZDHHC1Q8WTX9 485 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 KRT35Q92764 455 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 LIN37Q96GY3 246 aaPredicted RBP13.21□□□□□ -0.29
CLCC1-202ENST00000348264 MRFAP1L1Q96HT8 127 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 SLC46A1Q96NT5 459 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 MLPHQ9BV36 600 aaPredicted RBP13.21□□□□□ -0.29
CLCC1-202ENST00000348264 ADGRE3Q9BY15 652 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 CDH19Q9H159 772 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 SLC25A51Q9H1U9 297 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 GLOD4Q9HC38 313 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 EPB41L5Q9HCM4 733 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 THSD1Q9NS62 852 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 CNOT6Q9ULM6 557 aaKnown RBP13.21□□□□□ -0.29
CLCC1-202ENST00000348264 PCDHGA8Q9Y5G5 932 aa13.21□□□□□ -0.29
CLCC1-202ENST00000348264 A0A0A6YYK5 440 aaPredicted RBP13.2□□□□□ -0.3
CLCC1-202ENST00000348264 CDRT15L2A8MXV6 281 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 ECEL1O95672 775 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 SLC4A1P02730 911 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 ATP1A1P05023 1023 aaKnown RBP13.2□□□□□ -0.3
CLCC1-202ENST00000348264 PNLIPP16233 465 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 FECHP22830 423 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 CD68P34810 354 aaPredicted RBP13.2□□□□□ -0.3
CLCC1-202ENST00000348264 CYLC1P35663 651 aaPredicted RBP13.2□□□□□ -0.3
CLCC1-202ENST00000348264 ACTR1BP42025 376 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 NR2C2P49116 596 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 ACTR1AP61163 376 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 WASHC5Q12768 1159 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 TFDP2Q14188 446 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 SPA17Q15506 151 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 SLC14A2Q15849 920 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 TEX44Q53QW1 395 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 TFDP3Q5H9I0 405 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 ZNF438Q7Z4V0 828 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 NAGSQ8N159 534 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 EXD1Q8NHP7 514 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 HAUS1Q96CS2 278 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 PANX2Q96RD6 677 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 PRORYQ9H606 182 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 PKD2L2Q9NZM6 624 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 SHOC2Q9UQ13 582 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 REXO2Q9Y3B8 237 aaKnown RBP13.2□□□□□ -0.3
CLCC1-202ENST00000348264 ZNF711Q9Y462 761 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 KALRNO60229 2985 aa13.2□□□□□ -0.3
CLCC1-202ENST00000348264 PLD2O14939 933 aa13.19□□□□□ -0.3
CLCC1-202ENST00000348264 DNAJC6O75061 913 aa13.19□□□□□ -0.3
CLCC1-202ENST00000348264 TNFSF15O95150 251 aa13.19□□□□□ -0.3
CLCC1-202ENST00000348264 NDUFA10O95299 355 aa13.19□□□□□ -0.3
CLCC1-202ENST00000348264 HGFP14210 728 aa13.19□□□□□ -0.3
CLCC1-202ENST00000348264 RBMS1P29558 406 aaKnown RBP13.19□□□□□ -0.3
CLCC1-202ENST00000348264 CCKBRP32239 447 aa13.19□□□□□ -0.3
CLCC1-202ENST00000348264 INHBCP55103 352 aa13.19□□□□□ -0.3
CLCC1-202ENST00000348264 B4GALNT1Q00973 533 aa13.19□□□□□ -0.3
CLCC1-202ENST00000348264 CDK18Q07002 472 aa13.19□□□□□ -0.3
CLCC1-202ENST00000348264 NR1D2Q14995 579 aa13.19□□□□□ -0.3
CLCC1-202ENST00000348264 SOWAHCQ53LP3 525 aaPredicted RBP13.19□□□□□ -0.3
CLCC1-202ENST00000348264 ALS2CLQ60I27 953 aa13.19□□□□□ -0.3
CLCC1-202ENST00000348264 DAAM2Q86T65 1068 aa13.19□□□□□ -0.3
CLCC1-202ENST00000348264 ZC3H18Q86VM9 953 aaKnown RBP13.19□□□□□ -0.3
CLCC1-202ENST00000348264 GAS2L3Q86XJ1 694 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms