RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 TEX28O15482 410 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 HOXA2O43364 376 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 TM7SF2O76062 418 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 CPSF4O95639 269 aaKnown RBP13.26□□□□□ -0.29
CASC4-202ENST00000345795 MTHFD1P11586 935 aaKnown RBP13.26□□□□□ -0.29
CASC4-202ENST00000345795 CKMT2P17540 419 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 CCNG1P51959 295 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 AQP4P55087 323 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 PM20D1Q6GTS8 502 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 RFLNAQ6ZTI6 216 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 SPPL2CQ8IUH8 684 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 MFSD6LQ8IWD5 586 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 MYO1HQ8N1T3 1032 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 DPF3Q92784 378 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 SH3KBP1Q96B97 665 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 GVINP1Q7Z2Y8 2422 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 TLL1O43897 1013 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 RPP40O75818 363 aaKnown RBP13.25□□□□□ -0.29
CASC4-202ENST00000345795 HLA-EP13747 358 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 CTSOP43234 321 aaPredicted RBP13.25□□□□□ -0.29
CASC4-202ENST00000345795 C1QTNF8P60827 252 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 SERINC3Q13530 473 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 C6orf52Q5T4I8 152 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 SLC22A15Q8IZD6 547 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 FBXO30Q8TB52 745 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 RNF217Q8TC41 542 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 TMEM74Q96NL1 305 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 ZNF184Q99676 751 aaPredicted RBP13.25□□□□□ -0.29
CASC4-202ENST00000345795 C2orf49Q9BVC5 232 aaPredicted RBP13.25□□□□□ -0.29
CASC4-202ENST00000345795 ZFYVE1Q9HBF4 777 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 RGSL1A5PLK6 1076 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 G3V2L1 256 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 STC2O76061 302 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 PRAMEF12O95522 483 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 TSHRP16473 764 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 ZNF23P17027 643 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 ITGAXP20702 1163 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 ME2P23368 584 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 AQP1P29972 269 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 CLCN5P51795 746 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 DGKQP52824 942 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 MAVSQ7Z434 540 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 TWIST2Q8WVJ9 160 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 EBF3Q9H4W6 596 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 CFAP20Q9Y6A4 193 aaKnown RBP13.25□□□□□ -0.29
CASC4-202ENST00000345795 FER1L6Q2WGJ9 1857 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 A0A1B0GVM2 712 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 ZNF840PA6NDX5 716 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 TCAF2A6NFQ2 919 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 M0QZQ0 153 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 SYN3O14994 580 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 ESRRBO95718 433 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 CLIC3O95833 236 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 IL1BP01584 269 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 GTF2H3Q13889 308 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 ACOX1Q15067 660 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 CRY1Q16526 586 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 ATP6AP1LQ52LC2 224 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 WASHC2DQ5SRD0 308 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 ADGRF1Q5T601 910 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 FAM180BQ6P0A1 224 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 CRTC3Q6UUV7 619 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 FAM126BQ8IXS8 530 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 SPDYE1Q8NFV5 336 aaPredicted RBP13.25□□□□□ -0.29
CASC4-202ENST00000345795 STAG3L4Q8TBR4 150 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 WFDC5Q8TCV5 224 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 C19orf60Q96EN9 201 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 RNF145Q96MT1 663 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 ECSITQ9BQ95 431 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 C11orf84Q9BUA3 381 aaPredicted RBP13.25□□□□□ -0.29
CASC4-202ENST00000345795 ADNPQ9H2P0 1102 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 NSUN3Q9H649 340 aaKnown RBP13.25□□□□□ -0.29
CASC4-202ENST00000345795 EIF2B3Q9NR50 452 aaKnown RBP13.25□□□□□ -0.29
CASC4-202ENST00000345795 ASAH2Q9NR71 780 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 SPG21Q9NZD8 308 aa13.25□□□□□ -0.29
CASC4-202ENST00000345795 TDRKHQ9Y2W6 561 aaKnown RBP13.25□□□□□ -0.29
CASC4-202ENST00000345795 A0A0J9YYE9 177 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 AZIN1O14977 448 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 TOMM70O94826 608 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 FGF1P05230 155 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 HOXD8P13378 290 aaPredicted RBP13.24□□□□□ -0.29
CASC4-202ENST00000345795 LRRC74AQ0VAA2 488 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 CYP51A1Q16850 503 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 RAB41Q5JT25 222 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 ATG14Q6ZNE5 492 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 ZNF461Q8TAF7 563 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 IGSF21Q96ID5 467 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 LINC00597Q9H2U6 94 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 NOL6Q9H6R4 1146 aaKnown RBP13.24□□□□□ -0.29
CASC4-202ENST00000345795 VPS51Q9UID3 782 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 TNS1Q9HBL0 1735 aaKnown RBP13.24□□□□□ -0.29
CASC4-202ENST00000345795 PDLIM1O00151 329 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 CLDN11O75508 207 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 GBAP04062 536 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 RGS4P49798 205 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 AIF1P55008 147 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 GRB7Q14451 532 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 SEMA3AQ14563 771 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 SERPINA9Q86WD7 417 aa13.24□□□□□ -0.29
CASC4-202ENST00000345795 TRAPPC5Q8IUR0 188 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms