RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 TXNDC16Q9P2K2 825 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 THAP10Q9P2Z0 257 aaPredicted RBP13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 SLC27A6Q9Y2P4 619 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 HEATR9A2RTY3 570 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 EIF4E1BA6NMX2 242 aaKnown RBP13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 NDUFAB1O14561 156 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 UGT1A9O60656 530 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 FGF1P05230 155 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 TPH1P17752 444 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 HLA-DPA1P20036 260 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 IL12RB1P42701 662 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 SERPINH1P50454 418 aaKnown RBP13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 COPAP53621 1224 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 CSE1LP55060 971 aaKnown RBP13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 CYP4F3Q08477 520 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 LAMB3Q13751 1172 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 MPP2Q14168 576 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 POU6F1Q14863 301 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 SLC1A5Q15758 541 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 GLIPR1L2Q4G1C9 344 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 GRTP1Q5TC63 336 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 TIFABQ6ZNK6 161 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 DCAF4L2Q8NA75 395 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 ACMSDQ8TDX5 336 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 RHBDD1Q8TEB9 315 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 DENND1AQ8TEH3 1009 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 CKAP2Q8WWK9 683 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 CHMP6Q96FZ7 201 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 MAGEB18Q96M61 343 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 MIR1-1HGQ9H1L0 117 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 UGT1A7Q9HAW7 530 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 UGT1A10Q9HAW8 530 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 UGT1A8Q9HAW9 530 aa13.5□□□□□ -0.25
HERPUD1-202ENST00000344114 MUC22E2RYF6 1773 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 CXorf51AA0A1B0GTR3 108 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 LOC285095A0A1B0GVY8 99 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 TRABD2BA6NFA1 517 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 CBX4O00257 560 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 MUSKO15146 869 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 ASMTLO95671 621 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 PENKP01210 267 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 EPOP01588 193 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 CYBBP04839 570 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 ERVK-10P10266 1014 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 NMBRP28336 390 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 NEK3P51956 506 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 LRRC14Q15048 493 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 SEPT7Q16181 437 aaKnown RBP13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 ZSCAN26Q16670 478 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 INO80DQ53TQ3 878 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 KIAA0930Q6ICG6 404 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 CES3Q6UWW8 571 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 NLRP9Q7RTR0 991 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 MARCH9Q86YJ5 346 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 TMPRSS6Q8IU80 811 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 MFN1Q8IWA4 741 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 UNC5BQ8IZJ1 945 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 GABPB2Q8TAK5 448 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 MFSD3Q96ES6 412 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 SIPA1Q96FS4 1042 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 IFT43Q96FT9 208 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 CRELD1Q96HD1 420 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 SERAC1Q96JX3 654 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 ZNF317Q96PQ6 595 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 CCT8L2Q96SF2 557 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 PCED1AQ9H1Q7 454 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 CHRAC1Q9NRG0 131 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 PLK2Q9NYY3 685 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 EIF2B4Q9UI10 523 aaKnown RBP13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 BTBD3Q9Y2F9 522 aa13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 SETXQ7Z333 2677 aaKnown RBP13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 COL5A1P20908 1838 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-202ENST00000344114 A0A1B0GVT2 93 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 ZMPSTE24O75844 475 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 ZIC2O95409 532 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 C7P10643 843 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 CR2P20023 1033 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 GLDCP23378 1020 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 RPA3P35244 121 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 SPRP35270 261 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 CHRNA4P43681 627 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 SEC24CP53992 1094 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 WDR4P57081 412 aaKnown RBP13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 ARF5P84085 180 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 PPARDQ03181 441 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 CDK18Q07002 472 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 BMPR2Q13873 1038 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 SMAD1Q15797 465 aaKnown RBP13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 PTPRNQ16849 979 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 GEN1Q17RS7 908 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 RALGPS1Q5JS13 557 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 TEDDM1Q5T9Z0 273 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 HHATQ5VTY9 493 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 FYB2Q5VWT5 728 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 SH2D5Q6ZV89 423 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 TAX1BP1Q86VP1 789 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 CNTN4Q8IWV2 1026 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 SLC25A41Q8N5S1 370 aa13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 ZNF557Q8N988 423 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-202ENST00000344114 ZNF473Q8WTR7 871 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms