RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 TAC1P20366 129 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 TCEA1P23193 301 aaKnown RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 CD38P28907 300 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 STAT1P42224 750 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 MAGEA1P43355 309 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 GCNT1Q02742 428 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 FOXC1Q12948 553 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 COL28A1Q2UY09 1125 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 CDONQ4KMG0 1287 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 ANKRD20A4Q4UJ75 823 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 RBFAQ8N0V3 343 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 CENPSQ8N2Z9 138 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 GUF1Q8N442 669 aaKnown RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 TXNDC5Q8NBS9 432 aaKnown RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 BORCS5Q969J3 196 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 NT5C3BQ969T7 300 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 PHF12Q96QT6 1004 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 TREX2Q9BQ50 279 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 APOL5Q9BWW9 433 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 SPRY4Q9C004 299 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 NIF3L1Q9GZT8 377 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 GPAMQ9HCL2 828 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 GTSE1Q9NYZ3 720 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 PFDN2Q9UHV9 154 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 PCDHGA11Q9Y5H2 935 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 CENPBD1B2RD01 187 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 HAT1O14929 419 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 CSDE1O75534 798 aaKnown RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 SULT1C4O75897 302 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 RSL1D1O76021 490 aaKnown RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 FKBP9O95302 570 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 ESRRAP11474 423 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 CES1P23141 567 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 RCVRNP35243 200 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 EIF4A3P38919 411 aaKnown RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 DHPSP49366 369 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 ENTPD1P49961 510 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 C16orf72Q14CZ0 275 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 C10orf76Q5T2E6 689 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 ZNF449Q6P9G9 518 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 RGS9BPQ6ZS82 235 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 SLC51BQ86UW2 128 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 DTX1Q86Y01 620 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 MMAAQ8IVH4 418 aaKnown RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 CMTR1Q8N1G2 835 aaKnown RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 PPP4R1Q8TF05 950 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 DDI1Q8WTU0 396 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 ATL1Q8WXF7 558 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 FBXO32Q969P5 355 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 PITPNM3Q9BZ71 974 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 ZNF518BQ9C0D4 1074 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 PALMDQ9NP74 551 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 NDE1Q9NXR1 346 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 EGFL7Q9UHF1 273 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 BICDL2A1A5D9 508 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 MEI4A8MW99 385 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 F8W810 466 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 PHF2O75151 1096 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 CRYZL1O95825 349 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 SLC2A4P14672 509 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 NAGAP17050 411 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 CTRB1P17538 263 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 CDK9P50750 372 aaKnown RBP7.32□□□□□ -1.24
ZNF540-202ENST00000343599 BLKP51451 505 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 NUP107P57740 925 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 APOFQ13790 326 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 RFTN1Q14699 578 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-202ENST00000343599 CTRB2Q6GPI1 263 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 MARVELD2Q8N4S9 558 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 PCDH20Q8N6Y1 951 aaKnown RBP7.32□□□□□ -1.24
ZNF540-202ENST00000343599 ANKRD42Q8N9B4 389 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 PCYOX1LQ8NBM8 494 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 TOR1AIP2Q8NFQ8 470 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 EXD1Q8NHP7 514 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 ACTRT2Q8TDY3 377 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 EPS8L3Q8TE67 593 aaKnown RBP7.32□□□□□ -1.24
ZNF540-202ENST00000343599 C10orf82Q8WW14 230 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 ANAPC16Q96DE5 110 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 MYO19Q96H55 970 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 FRMD6Q96NE9 622 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 AIFM3Q96NN9 605 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 BTBD9Q96Q07 612 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 ERGIC2Q96RQ1 377 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 OLFM1Q99784 485 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 NT5C1AQ9BXI3 368 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 TRIM55Q9BYV6 548 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 ZNF696Q9H7X3 374 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 CFAP97Q9P2B7 532 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 PADI4Q9UM07 663 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 PPIL1Q9Y3C6 166 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 PCDHGA9Q9Y5G4 932 aaKnown RBP7.32□□□□□ -1.24
ZNF540-202ENST00000343599 A0A087X0B3 334 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 C15orf38-AP3S2A0A0A6YYH1 394 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 TYW5A2RUC4 315 aaKnown RBP7.32□□□□□ -1.24
ZNF540-202ENST00000343599 K7EPI3 171 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 TLR4O00206 839 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 NRG2O14511 850 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-202ENST00000343599 RASGRF2O14827 1237 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 ZBTB39O15060 712 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 CHEK2O96017 543 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms