RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 C12orf40Q86WS4 652 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 ZNF227Q86WZ6 799 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 SIAH1Q8IUQ4 282 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 CPA6Q8N4T0 437 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 C12orf45Q8N5I9 185 aaPredicted RBP4.15□□□□□ -1.75
NEDD4-201ENST00000338963 PKP2Q99959 881 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 LBHD1Q9BQE6 289 aaPredicted RBP4.15□□□□□ -1.75
NEDD4-201ENST00000338963 SLC25A23Q9BV35 468 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 CABP2Q9NPB3 220 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 RGS17Q9UGC6 210 aaPredicted RBP4.15□□□□□ -1.75
NEDD4-201ENST00000338963 MTF2Q9Y483 593 aaPredicted RBP4.15□□□□□ -1.75
NEDD4-201ENST00000338963 FRMPD1Q5SYB0 1578 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 TMEM131LA2VDJ0 1609 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 SULT1C2O00338 296 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 PROM1O43490 865 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 BANF1O75531 89 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 CYP11A1P05108 521 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 BPGMP07738 259 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 FBP1P09467 338 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 CREB1P16220 341 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 DDCP20711 480 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 CTNNB1P35222 781 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 KLK7P49862 253 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 ABCE1P61221 599 aaKnown RBP4.15□□□□□ -1.75
NEDD4-201ENST00000338963 PON3Q15166 354 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 NTRK3Q16288 839 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 PARP15Q460N3 678 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 LDLRAP1Q5SW96 308 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 LRRC55Q6ZSA7 311 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 EIF3MQ7L2H7 374 aaKnown RBP4.15□□□□□ -1.75
NEDD4-201ENST00000338963 COPS6Q7L5N1 327 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 VN1R5Q7Z5H4 357 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 CCDC71Q8IV32 467 aaPredicted RBP4.15□□□□□ -1.75
NEDD4-201ENST00000338963 SKA3Q8IX90 412 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 DTX3Q8N9I9 347 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 ELP5Q8TE02 316 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 CNDP1Q96KN2 507 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 SPACA7Q96KW9 195 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 CCM2Q9BSQ5 444 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 MYL10Q9BUA6 226 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 RNF32Q9H0A6 362 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 ELOVL6Q9H5J4 265 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 ASNSD1Q9NWL6 643 aa4.15□□□□□ -1.75
NEDD4-201ENST00000338963 AFF4Q9UHB7 1163 aaKnown RBP4.15□□□□□ -1.75
NEDD4-201ENST00000338963 A0A075B6Q4 140 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ATP6AP2A0A1C7CYW4 349 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 OR6C70A6NIJ9 312 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 WDR64B1ANS9 1081 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 TERTO14746 1132 aaKnown RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 CYP2A6P11509 494 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ETV6P41212 452 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 RPL35P42766 123 aaKnown RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ALDH9A1P49189 494 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 KPNA2P52292 529 aaKnown RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ALDH6A1Q02252 535 aaKnown RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 DRAP1Q14919 205 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 HIF1AQ16665 826 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 GPR33Q49SQ1 333 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 KLHL26Q53HC5 615 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 TBCELQ5QJ74 424 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 SLFN12LQ6IEE8 588 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 SULT6B1Q6IMI4 303 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 PRR5LQ6MZQ0 368 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 HSD17B13Q7Z5P4 300 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 SNX20Q7Z614 316 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 TCTEX1D2Q8WW35 142 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 FEM1CQ96JP0 617 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 LRFN5Q96NI6 719 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ILKAPQ9H0C8 392 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 MRPS30Q9NP92 439 aaKnown RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 MYEF2Q9P2K5 600 aaKnown RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ANAPC7Q9UJX3 599 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ELF5Q9UKW6 265 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 PDE10AQ9Y233 779 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 TRAV20A0A0B4J274 112 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 TMEM210A6NLX4 147 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ZNF729A6NN14 1252 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 E7ENX8 843 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 GRM8O00222 908 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 CYP7B1O75881 506 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 CIAO1O76071 339 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 LDLRP01130 860 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 HOXD4P09016 255 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 CPN2P22792 545 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 NR0B1P51843 470 aaKnown RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 CDH6P55285 790 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 MYL6P60660 151 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ZNF91Q05481 1191 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 MGAT3Q09327 533 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 FAM214AQ32MH5 1076 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 PLEKHG4Q58EX7 1191 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 SPOCD1Q6ZMY3 1216 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 OR8H3Q8N146 312 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 CMASQ8NFW8 434 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 OR2T34Q8NGX1 318 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 OR2T3Q8NH03 318 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 MAGEE2Q8TD90 523 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 FAR1Q8WVX9 515 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 SLC9A7Q96T83 725 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 RNF121Q9H920 327 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms