RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 H0Y858 1186 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 AIM2O14862 343 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 ADAM12O43184 909 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 MAP3K13O43283 966 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 NARSO43776 548 aaKnown RBP10.77□□□□□ -0.69
RTN3-201ENST00000338850 XRCC1P18887 633 aaPredicted RBP10.77□□□□□ -0.69
RTN3-201ENST00000338850 IMPDH1P20839 514 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 CD9P21926 228 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 IGFBP6P24592 240 aaPredicted RBP10.77□□□□□ -0.69
RTN3-201ENST00000338850 GSTT1P30711 240 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 SERPINH1P50454 418 aaKnown RBP10.77□□□□□ -0.69
RTN3-201ENST00000338850 MLLT6P55198 1093 aaPredicted RBP10.77□□□□□ -0.69
RTN3-201ENST00000338850 PSME3P61289 254 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 MPP1Q00013 466 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 LRP8Q14114 963 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 SAMD4BQ5PRF9 694 aaKnown RBP10.77□□□□□ -0.69
RTN3-201ENST00000338850 FAM182AQ5T1J6 154 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 BTBD8Q5XKL5 378 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 ZNF470Q6ECI4 717 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 ESRP1Q6NXG1 681 aaKnown RBP10.77□□□□□ -0.69
RTN3-201ENST00000338850 CD300LGQ6UXG3 332 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 CEP97Q8IW35 865 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 IPMKQ8NFU5 416 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 RHEBL1Q8TAI7 183 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 SHKBP1Q8TBC3 707 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 NAT14Q8WUY8 206 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 HEXDCQ8WVB3 486 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.77□□□□□ -0.69
RTN3-201ENST00000338850 ZUFSPQ96AP4 578 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 DGCR14Q96DF8 476 aaKnown RBP10.77□□□□□ -0.69
RTN3-201ENST00000338850 ATXN7L3BQ96GX2 97 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 ELMO2Q96JJ3 720 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 C8orf48Q96LL4 319 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 ZNF597Q96LX8 424 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 CATSPER2Q96P56 530 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 OMDQ99983 421 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 EFHD1Q9BUP0 239 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 OSBPL11Q9BXB4 747 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 IRF2BPLQ9H1B7 796 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 WDR55Q9H6Y2 383 aaPredicted RBP10.77□□□□□ -0.69
RTN3-201ENST00000338850 SUDS3Q9H7L9 328 aaPredicted RBP10.77□□□□□ -0.69
RTN3-201ENST00000338850 PIDD1Q9HB75 910 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 RBM22Q9NW64 420 aaKnown RBP eCLIP10.77□□□□□ -0.69
RTN3-201ENST00000338850 IL37Q9NZH6 218 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 CD300AQ9UGN4 299 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 TMCO1Q9UM00 188 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 SCML2Q9UQR0 700 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 PCDHGA7Q9Y5G6 932 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 AP4B1Q9Y6B7 739 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 AQP12BA6NM10 295 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 E9PAM4 449 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 DFFAO00273 331 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 UBDO15205 165 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 VPS4BO75351 444 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 B3GAT3O94766 335 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 MATN4O95460 622 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 CRTAMO95727 393 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 FGF1P05230 155 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 TPH1P17752 444 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 HLA-DPA1P20036 260 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 FDXRP22570 491 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 FGFR3P22607 806 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 SLC7A1P30825 629 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 MAGEA11P43364 429 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 WNT3AP56704 352 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 YBEYP58557 167 aaPredicted RBP10.76□□□□□ -0.69
RTN3-201ENST00000338850 TUBA4AP68366 448 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 BNIP2Q12982 314 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 POU6F1Q14863 301 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 TLR1Q15399 786 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 THEMIS2Q5TEJ8 643 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 FBXL19Q6PCT2 694 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 GET4Q7L5D6 327 aaPredicted RBP10.76□□□□□ -0.69
RTN3-201ENST00000338850 EFL1Q7Z2Z2 1120 aaKnown RBP10.76□□□□□ -0.69
RTN3-201ENST00000338850 CUZD1Q86UP6 607 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 CILP2Q8IUL8 1156 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 DENND6AQ8IWF6 608 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 CHERPQ8IWX8 916 aaKnown RBP10.76□□□□□ -0.69
RTN3-201ENST00000338850 AQP12AQ8IXF9 295 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 NUP93Q8N1F7 819 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 SLC44A3Q8N4M1 653 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 FLCNQ8NFG4 579 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 BHLHE22Q8NFJ8 381 aaPredicted RBP10.76□□□□□ -0.69
RTN3-201ENST00000338850 EDEM1Q92611 657 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 ATOH1Q92858 354 aaPredicted RBP10.76□□□□□ -0.69
RTN3-201ENST00000338850 RNF34Q969K3 372 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 NXPE3Q969Y0 559 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 ZNF419Q96HQ0 510 aaPredicted RBP10.76□□□□□ -0.69
RTN3-201ENST00000338850 FEM1CQ96JP0 617 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 FCRL2Q96LA5 508 aaPredicted RBP10.76□□□□□ -0.69
RTN3-201ENST00000338850 ZNF599Q96NL3 588 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 APOL2Q9BQE5 337 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 C1QTNF3Q9BXJ4 246 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 RBM38Q9H0Z9 239 aaKnown RBP10.76□□□□□ -0.69
RTN3-201ENST00000338850 FBXO44Q9H4M3 255 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 GSTO2Q9H4Y5 243 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 SPAG4Q9NPE6 437 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 OLA1Q9NTK5 396 aaKnown RBP10.76□□□□□ -0.69
RTN3-201ENST00000338850 ARMC1Q9NVT9 282 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 CACNA2D2Q9NY47 1150 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms