RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 C2orf81A6NN90 581 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 SCAMP1O15126 338 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 ERLIN1O75477 346 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 USP1O94782 785 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 PRAMEF1O95521 474 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 TTC4O95801 387 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 IRF4Q15306 451 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 KBTBD6Q86V97 674 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 HORMAD1Q86X24 394 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 PALM2Q8IXS6 379 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 TP53I13Q8NBR0 393 aaPredicted RBP16.44■□□□□ 0.22
SHOX-201ENST00000334060 RAB7BQ96AH8 199 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 BOCQ9BWV1 1114 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 IARS2Q9NSE4 1012 aaKnown RBP16.44■□□□□ 0.22
SHOX-201ENST00000334060 C20orf96Q9NUD7 363 aaPredicted RBP16.44■□□□□ 0.22
SHOX-201ENST00000334060 OR1A2Q9Y585 309 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 FAM169AQ9Y6X4 670 aa16.44■□□□□ 0.22
SHOX-201ENST00000334060 GPR179Q6PRD1 2367 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 TSPAN6O43657 245 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 OR1I1O60431 355 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 RPP40O75818 363 aaKnown RBP16.43■□□□□ 0.22
SHOX-201ENST00000334060 GABRB3P28472 473 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 FOXN2P32314 431 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 IGFALSP35858 605 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 GMPRP36959 345 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 CBLBQ13191 982 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 ANGPT1Q15389 498 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 LPAL2Q16609 132 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 KBTBD12Q3ZCT8 623 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 HENMT1Q5T8I9 393 aaKnown RBP16.43■□□□□ 0.22
SHOX-201ENST00000334060 MAMSTRQ6ZN01 415 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.43■□□□□ 0.22
SHOX-201ENST00000334060 STYXQ8WUJ0 223 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 SNX19Q92543 992 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 RUBCNQ92622 972 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 NUS1Q96E22 293 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 C1QTNF2Q9BXJ5 285 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 SLC17A9Q9BYT1 436 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 PPANQ9NQ55 473 aaKnown RBP16.43■□□□□ 0.22
SHOX-201ENST00000334060 MOCS1Q9NZB8 636 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 HACD3Q9P035 362 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 PNMA8BQ9ULN7 279 aaPredicted RBP16.43■□□□□ 0.22
SHOX-201ENST00000334060 SCML1Q9UN30 329 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 PKP3Q9Y446 797 aa16.43■□□□□ 0.22
SHOX-201ENST00000334060 A0A1W2PQ67 120 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 EIF3HO15372 352 aaKnown RBP eCLIP16.42■□□□□ 0.22
SHOX-201ENST00000334060 TM7SF2O76062 418 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 GCAP28676 217 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 GTF2A1P52655 376 aaPredicted RBP16.42■□□□□ 0.22
SHOX-201ENST00000334060 RPL6Q02878 288 aaKnown RBP16.42■□□□□ 0.22
SHOX-201ENST00000334060 KCNMB4Q86W47 210 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 RELL1Q8IUW5 271 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 EIF1ADQ8N9N8 165 aaKnown RBP16.42■□□□□ 0.22
SHOX-201ENST00000334060 OR2T34Q8NGX1 318 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 CAVIN3Q969G5 261 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 AP2M1Q96CW1 435 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 CERS2Q96G23 380 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 ATXN7L3BQ96GX2 97 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 FRMD8Q9BZ67 464 aaPredicted RBP16.42■□□□□ 0.22
SHOX-201ENST00000334060 TRABDQ9H4I3 376 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 MRM3Q9HC36 420 aaKnown RBP16.42■□□□□ 0.22
SHOX-201ENST00000334060 CTNNAL1Q9UBT7 734 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 RABGEF1Q9UJ41 708 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 CNOT6Q9ULM6 557 aaKnown RBP16.42■□□□□ 0.22
SHOX-201ENST00000334060 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.42■□□□□ 0.22
SHOX-201ENST00000334060 OAS3Q9Y6K5 1087 aaKnown RBP16.42■□□□□ 0.22
SHOX-201ENST00000334060 KNL1Q8NG31 2342 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 GLYATL1P3A0A0U1RQE8 302 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 SRP72O76094 671 aaKnown RBP16.42■□□□□ 0.22
SHOX-201ENST00000334060 SLC34A2O95436 690 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 POLBP06746 335 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 ZNF30P17039 623 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 SPAM1P38567 509 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 SLC1A2P43004 574 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 PDE1CQ14123 709 aaPredicted RBP16.42■□□□□ 0.22
SHOX-201ENST00000334060 ZRANB3Q5FWF4 1079 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 NDUFAF2Q8N183 169 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 GSDMBQ8TAX9 411 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 CENPTQ96BT3 561 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 SPATA16Q9BXB7 569 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 FAM83DQ9H4H8 585 aa16.42■□□□□ 0.22
SHOX-201ENST00000334060 FBXO6Q9NRD1 293 aaPredicted RBP16.42■□□□□ 0.22
SHOX-201ENST00000334060 RRP15Q9Y3B9 282 aaKnown RBP16.42■□□□□ 0.22
SHOX-201ENST00000334060 H0Y858 1186 aa16.41■□□□□ 0.22
SHOX-201ENST00000334060 POLR3GO15318 223 aaPredicted RBP16.41■□□□□ 0.22
SHOX-201ENST00000334060 SLC7A4O43246 635 aa16.41■□□□□ 0.22
SHOX-201ENST00000334060 SP9P0CG40 484 aa16.41■□□□□ 0.22
SHOX-201ENST00000334060 PSMA3P25788 255 aa16.41■□□□□ 0.22
SHOX-201ENST00000334060 PRAMEP78395 509 aa16.41■□□□□ 0.22
SHOX-201ENST00000334060 INPP5AQ14642 412 aa16.41■□□□□ 0.22
SHOX-201ENST00000334060 TCEA2Q15560 299 aa16.41■□□□□ 0.22
SHOX-201ENST00000334060 ZNF470Q6ECI4 717 aa16.41■□□□□ 0.22
SHOX-201ENST00000334060 KIAA0930Q6ICG6 404 aaPredicted RBP16.41■□□□□ 0.22
SHOX-201ENST00000334060 LRRC39Q96DD0 335 aa16.41■□□□□ 0.22
SHOX-201ENST00000334060 HSPA12BQ96MM6 686 aa16.41■□□□□ 0.22
SHOX-201ENST00000334060 FAM129AQ9BZQ8 928 aa16.41■□□□□ 0.22
SHOX-201ENST00000334060 SGK2Q9HBY8 427 aa16.41■□□□□ 0.22
SHOX-201ENST00000334060 PREBQ9HCU5 417 aa16.41■□□□□ 0.22
SHOX-201ENST00000334060 EIF2B4Q9UI10 523 aaKnown RBP16.41■□□□□ 0.22
SHOX-201ENST00000334060 ADAM21Q9UKJ8 722 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms