RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 PTPRRQ15256 657 aa17.33■□□□□ 0.36
DDX28-201ENST00000332395 PTPRNQ16849 979 aa17.33■□□□□ 0.36
DDX28-201ENST00000332395 PIGGQ5H8A4 983 aa17.33■□□□□ 0.36
DDX28-201ENST00000332395 CYHR1Q6ZMK1 362 aa17.33■□□□□ 0.36
DDX28-201ENST00000332395 GK5Q6ZS86 529 aa17.33■□□□□ 0.36
DDX28-201ENST00000332395 PIANPQ8IYJ0 282 aa17.33■□□□□ 0.36
DDX28-201ENST00000332395 KIAA1191Q96A73 305 aa17.33■□□□□ 0.36
DDX28-201ENST00000332395 WDR41Q9HAD4 459 aa17.33■□□□□ 0.36
DDX28-201ENST00000332395 VPS9D1Q9Y2B5 631 aa17.33■□□□□ 0.36
DDX28-201ENST00000332395 TYW5A2RUC4 315 aaKnown RBP17.32■□□□□ 0.36
DDX28-201ENST00000332395 STX7O15400 261 aaKnown RBP17.32■□□□□ 0.36
DDX28-201ENST00000332395 GREM1O60565 184 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 KERAO60938 352 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 GFAPP14136 432 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 MNX1P50219 401 aaPredicted RBP17.32■□□□□ 0.36
DDX28-201ENST00000332395 THOP1P52888 689 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 RHOAP61586 193 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 SH3BP2P78314 561 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 ZXDBP98169 803 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 RAD51Q06609 339 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 TXNDC8Q6A555 127 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 RNF111Q6ZNA4 994 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 KBTBD6Q86V97 674 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 TTC30BQ8N4P2 665 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 ARL14EPQ8N8R7 260 aaPredicted RBP17.32■□□□□ 0.36
DDX28-201ENST00000332395 HMGCLL1Q8TB92 370 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 STAG3L4Q8TBR4 150 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 RNF217Q8TC41 542 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 UCMAQ8WVF2 138 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 TMA16Q96EY4 203 aaKnown RBP17.32■□□□□ 0.36
DDX28-201ENST00000332395 BIRC8Q96P09 236 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 ASB2Q96Q27 587 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 GPR21Q99679 349 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 NPAS2Q99743 824 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 RC3H2Q9HBD1 1191 aaKnown RBP17.32■□□□□ 0.36
DDX28-201ENST00000332395 BPIFA1Q9NP55 256 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 SPG21Q9NZD8 308 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 FNDC3AQ9Y2H6 1198 aaKnown RBP17.32■□□□□ 0.36
DDX28-201ENST00000332395 FCF1Q9Y324 198 aaKnown RBP17.32■□□□□ 0.36
DDX28-201ENST00000332395 OR51B4Q9Y5P0 310 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 OAS3Q9Y6K5 1087 aaKnown RBP17.32■□□□□ 0.36
DDX28-201ENST00000332395 LRRC14BA6NHZ5 514 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 CFLARO15519 480 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 GPC4O75487 556 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 CDK14O94921 469 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 CSKP41240 450 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 TTPAP49638 278 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 CDH18Q13634 790 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 ZNF423Q2M1K9 1284 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 DDX53Q86TM3 631 aaKnown RBP17.32■□□□□ 0.36
DDX28-201ENST00000332395 CLYBLQ8N0X4 340 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 WFDC5Q8TCV5 224 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 C19orf60Q96EN9 201 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 SAGE1Q9NXZ1 904 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 VPS51Q9UID3 782 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 RNF112Q9ULX5 631 aa17.32■□□□□ 0.36
DDX28-201ENST00000332395 A0A0U1RQS6 177 aa17.31■□□□□ 0.36
DDX28-201ENST00000332395 SUPT3HB4E1H0 165 aa17.31■□□□□ 0.36
DDX28-201ENST00000332395 GFRA2O00451 464 aa17.31■□□□□ 0.36
DDX28-201ENST00000332395 SUPT3HO75486 399 aa17.31■□□□□ 0.36
DDX28-201ENST00000332395 OLFM2O95897 454 aa17.31■□□□□ 0.36
DDX28-201ENST00000332395 DPP6P42658 865 aa17.31■□□□□ 0.36
DDX28-201ENST00000332395 ATP6V0D1P61421 351 aa17.31■□□□□ 0.36
DDX28-201ENST00000332395 DEFB103AP81534 67 aa17.31■□□□□ 0.36
DDX28-201ENST00000332395 FASTKQ14296 549 aaKnown RBP17.31■□□□□ 0.36
DDX28-201ENST00000332395 UGT3A2Q3SY77 523 aa17.31■□□□□ 0.36
DDX28-201ENST00000332395 ZRANB3Q5FWF4 1079 aa17.31■□□□□ 0.36
DDX28-201ENST00000332395 IZUMO2Q6UXV1 221 aa17.31■□□□□ 0.36
DDX28-201ENST00000332395 Q6ZNB5 142 aa17.31■□□□□ 0.36
DDX28-201ENST00000332395 LARP4Q71RC2 724 aaKnown RBP eCLIP17.31■□□□□ 0.36
DDX28-201ENST00000332395 BHMTQ93088 406 aa17.31■□□□□ 0.36
DDX28-201ENST00000332395 IL21Q9HBE4 155 aa17.31■□□□□ 0.36
DDX28-201ENST00000332395 HACD3Q9P035 362 aa17.31■□□□□ 0.36
DDX28-201ENST00000332395 IKZF3Q9UKT9 509 aa17.31■□□□□ 0.36
DDX28-201ENST00000332395 PCDHB9Q9Y5E1 797 aa17.31■□□□□ 0.36
DDX28-201ENST00000332395 CPQQ9Y646 472 aa17.31■□□□□ 0.36
DDX28-201ENST00000332395 ATP6AP2A0A1C7CYW4 349 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 PSMD12O00232 456 aaPredicted RBP17.3■□□□□ 0.36
DDX28-201ENST00000332395 PPP6CO00743 305 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 PFDN6O15212 129 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 OR1I1O60431 355 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 ATP6AP2O75787 350 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 MT-CO1P00395 513 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 PYGLP06737 847 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 FGF4P08620 206 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 PKMP14618 531 aaKnown RBP17.3■□□□□ 0.36
DDX28-201ENST00000332395 LAG3P18627 525 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 HDCP19113 662 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 PKNOX1P55347 436 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 PTK2BQ14289 1009 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 MAPRE2Q15555 327 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 TSNQ15631 228 aaKnown RBP17.3■□□□□ 0.36
DDX28-201ENST00000332395 ATXN7L2Q5T6C5 722 aaPredicted RBP17.3■□□□□ 0.36
DDX28-201ENST00000332395 RNF220Q5VTB9 566 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 TTC16Q8NEE8 873 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 USP13Q92995 863 aaPredicted RBP17.3■□□□□ 0.36
DDX28-201ENST00000332395 NSUN5Q96P11 429 aaKnown RBP17.3■□□□□ 0.36
DDX28-201ENST00000332395 TRAPPC9Q96Q05 1148 aa17.3■□□□□ 0.36
DDX28-201ENST00000332395 MRPL1Q9BYD6 325 aaKnown RBP17.3■□□□□ 0.36
DDX28-201ENST00000332395 MID1IP1Q9NPA3 183 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms