RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 RPS3P23396 243 aaKnown RBP eCLIP13.87□□□□□ -0.19
VAMP2-201ENST00000316509 ITGB8P26012 769 aa13.87□□□□□ -0.19
VAMP2-201ENST00000316509 KCNC1P48547 511 aa13.87□□□□□ -0.19
VAMP2-201ENST00000316509 ZXDBP98169 803 aa13.87□□□□□ -0.19
VAMP2-201ENST00000316509 XIAPP98170 497 aa13.87□□□□□ -0.19
VAMP2-201ENST00000316509 PEX6Q13608 980 aa13.87□□□□□ -0.19
VAMP2-201ENST00000316509 SQLEQ14534 574 aa13.87□□□□□ -0.19
VAMP2-201ENST00000316509 RCN1Q15293 331 aa13.87□□□□□ -0.19
VAMP2-201ENST00000316509 PDCD2Q16342 344 aaPredicted RBP13.87□□□□□ -0.19
VAMP2-201ENST00000316509 ZRANB3Q5FWF4 1079 aa13.87□□□□□ -0.19
VAMP2-201ENST00000316509 PAQR3Q6TCH7 311 aa13.87□□□□□ -0.19
VAMP2-201ENST00000316509 RIPOR1Q6ZS17 1223 aa13.87□□□□□ -0.19
VAMP2-201ENST00000316509 EFL1Q7Z2Z2 1120 aaKnown RBP13.87□□□□□ -0.19
VAMP2-201ENST00000316509 TMCO2Q7Z6W1 182 aaPredicted RBP13.87□□□□□ -0.19
VAMP2-201ENST00000316509 CBARPQ8N350 705 aaPredicted RBP13.87□□□□□ -0.19
VAMP2-201ENST00000316509 FBXW8Q8N3Y1 598 aa13.87□□□□□ -0.19
VAMP2-201ENST00000316509 BIRC8Q96P09 236 aa13.87□□□□□ -0.19
VAMP2-201ENST00000316509 TUBGCP5Q96RT8 1024 aa13.87□□□□□ -0.19
VAMP2-201ENST00000316509 UNKQ9C0B0 810 aaKnown RBP13.87□□□□□ -0.19
VAMP2-201ENST00000316509 MRPL40Q9NQ50 206 aaKnown RBP13.87□□□□□ -0.19
VAMP2-201ENST00000316509 PFDN4Q9NQP4 134 aa13.87□□□□□ -0.19
VAMP2-201ENST00000316509 UTP6Q9NYH9 597 aaKnown RBP13.87□□□□□ -0.19
VAMP2-201ENST00000316509 ZMYM5Q9UJ78 669 aa13.87□□□□□ -0.19
VAMP2-201ENST00000316509 MCM8Q9UJA3 840 aa13.87□□□□□ -0.19
VAMP2-201ENST00000316509 TRMT6Q9UJA5 497 aaKnown RBP13.87□□□□□ -0.19
VAMP2-201ENST00000316509 APPL1Q9UKG1 709 aa13.87□□□□□ -0.19
VAMP2-201ENST00000316509 FCF1Q9Y324 198 aaKnown RBP13.87□□□□□ -0.19
VAMP2-201ENST00000316509 PCDHB9Q9Y5E1 797 aa13.87□□□□□ -0.19
VAMP2-201ENST00000316509 H3BMM5 538 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 VPS4BO75351 444 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 GPC4O75487 556 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 PTDSS1P48651 473 aaKnown RBP13.86□□□□□ -0.19
VAMP2-201ENST00000316509 IL2P60568 153 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 CYP4F8P98187 520 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 STX5Q13190 355 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 PPIGQ13427 754 aaKnown RBP eCLIP13.86□□□□□ -0.193e-7■■□□□ 12.3
VAMP2-201ENST00000316509 TLDC1Q6P9B6 456 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 EFHBQ8N7U6 833 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 PTGR2Q8N8N7 351 aaPredicted RBP13.86□□□□□ -0.19
VAMP2-201ENST00000316509 LEMD2Q8NC56 503 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 PPFIBP2Q8ND30 876 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 MOCOSQ96EN8 888 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 PANX3Q96QZ0 392 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 ATP13A3Q9H7F0 1226 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 CDH22Q9UJ99 828 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 KIAA1671Q9BY89 1806 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 LEFTY2O00292 366 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 FGBP02675 491 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 MTHFD2P13995 350 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 EPHA5P54756 1037 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 MTTPP55157 894 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 CRY1Q16526 586 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 PLEKHG6Q3KR16 790 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 SETMARQ53H47 684 aaPredicted RBP13.86□□□□□ -0.19
VAMP2-201ENST00000316509 ANKS6Q68DC2 871 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 BBS7Q8IWZ6 715 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 DEFB107AQ8IZN7 70 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 HS6ST3Q8IZP7 471 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 APCDD1Q8J025 514 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 CHCHD4Q8N4Q1 142 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 GRIN3AQ8TCU5 1115 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 RNF112Q9ULX5 631 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 MED16Q9Y2X0 877 aa13.86□□□□□ -0.19
VAMP2-201ENST00000316509 A0A0J9YYE9 177 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 UBDO15205 165 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 GLUD1P00367 558 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 TRBC1P01850 177 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 LINC00271P0C7V0 271 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 SPATA31D3P0C874 917 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 ZNF7P17097 686 aaPredicted RBP13.85□□□□□ -0.19
VAMP2-201ENST00000316509 SNRPD1P62314 119 aaKnown RBP13.85□□□□□ -0.19
VAMP2-201ENST00000316509 TBL3Q12788 808 aaKnown RBP13.85□□□□□ -0.19
VAMP2-201ENST00000316509 LMAN2Q12907 356 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 OR4D1Q15615 310 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 ACCSLQ4AC99 568 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 SPATA31D4Q6ZUB0 917 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 SNX32Q86XE0 403 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 PGAM4Q8N0Y7 254 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 RYBPQ8N488 228 aaPredicted RBP13.85□□□□□ -0.19
VAMP2-201ENST00000316509 FBXO39Q8N4B4 442 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 DNAJC5GQ8N7S2 189 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 KLHL23Q8NBE8 558 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 LMLNQ96KR4 655 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 CATSPER2Q96P56 530 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 LYSMD1Q96S90 227 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 GPR21Q99679 349 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 SHCBP1LQ9BZQ2 653 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 CEP44Q9C0F1 390 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 P2RY12Q9H244 342 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 ZFYVE1Q9HBF4 777 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 PPIL1Q9Y3C6 166 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 COPG1Q9Y678 874 aaKnown RBP13.85□□□□□ -0.19
VAMP2-201ENST00000316509 MEI4A8MW99 385 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 H0Y3Z8 333 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 PRMT5O14744 637 aaPredicted RBP13.85□□□□□ -0.19
VAMP2-201ENST00000316509 KRT36O76013 467 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 ACRP10323 421 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 GFAPP14136 432 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 SERPINA4P29622 427 aa13.85□□□□□ -0.19
VAMP2-201ENST00000316509 CA8P35219 290 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms