RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 TMEM199Q8N511 208 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 ANKFN1Q8N957 763 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 KDM1BQ8NB78 822 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 MINDY2Q8NBR6 621 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 ADAMTS16Q8TE57 1224 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 ZNF512Q96ME7 567 aaPredicted RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 TMEM79Q9BSE2 394 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 RHOJQ9H4E5 214 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 UBP1Q9NZI7 540 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 MARCH2Q9P0N8 246 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 PTBP2Q9UKA9 531 aaKnown RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 REV3LO60673 3130 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 A0A1B0GTW7 788 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 TTC34A8MYJ7 566 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 TK2O00142 265 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 AP3B1O00203 1094 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 SDHDO14521 159 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 TLR5O60602 858 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 USP12O75317 370 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 GJB5O95377 273 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 PABPC1P11940 636 aaKnown RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 PTPN3P26045 913 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 CCR10P46092 362 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 GSSP48637 474 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 HNRNPFP52597 415 aaKnown RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 TUBA1BP68363 451 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 SLC12A1Q13621 1099 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 LRP8Q14114 963 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 GRM3Q14832 879 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 PUS10Q3MIT2 529 aaKnown RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 KCTD21Q4G0X4 260 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 PPP4R4Q6NUP7 873 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 TUBA1AQ71U36 451 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 ACVR1CQ8NER5 493 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 LRTOMTQ8WZ04 291 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 TMIGD2Q96BF3 282 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 MYEOVQ96EZ4 313 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 PPP1R36Q96LQ0 422 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 CCDC138Q96M89 665 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 RANBP9Q96S59 729 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 ZBED2Q9BTP6 218 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 EFHD1Q9BUP0 239 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 TDRD1Q9BXT4 1180 aaKnown RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 RC3H2Q9HBD1 1191 aaKnown RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 MRM3Q9HC36 420 aaKnown RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 TLR8Q9NR97 1041 aaKnown RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 C20orf96Q9NUD7 363 aaPredicted RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 ADA2Q9NZK5 511 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 KLHL8Q9P2G9 620 aaPredicted RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 SLC39A10Q9ULF5 831 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 RUVBL2Q9Y230 463 aaKnown RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 BPTFQ12830 3046 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 PRRC2BQ5JSZ5 2229 aaKnown RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 COL4A6Q14031 1691 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 MYO9BQ13459 2157 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 HEATR9A2RTY3 570 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 KCNU1A8MYU2 1149 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 KIAA0355O15063 1070 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 DLX3O60479 287 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 CNTN5O94779 1100 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 EFEMP2O95967 443 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 AIF1P55008 147 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 NRF1Q16656 503 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 KRT80Q6KB66 452 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 LRRC8EQ6NSJ5 796 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 PDZD4Q76G19 769 aaPredicted RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 SPRED2Q7Z698 418 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 ZC3HC1Q86WB0 502 aaKnown RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 PACRGLQ8N7B6 248 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 ZNF461Q8TAF7 563 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 PTCD2Q8WV60 388 aaKnown RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 SLCO4A1Q96BD0 722 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 FAR2Q96K12 515 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 SERPINB11Q96P15 392 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 RETREG1Q9H6L5 497 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 CAAP1Q9H8G2 361 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 IARS2Q9NSE4 1012 aaKnown RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 CD300AQ9UGN4 299 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 NEU3Q9UQ49 428 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 PRELID1Q9Y255 219 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 A0A087WXM4 84 aa10.29□□□□□ -0.76
APOBEC3F-201ENST00000308521 E9PAM4 449 aa10.29□□□□□ -0.76
APOBEC3F-201ENST00000308521 KMOO15229 486 aa10.29□□□□□ -0.76
APOBEC3F-201ENST00000308521 HTRA2O43464 458 aaPredicted RBP10.29□□□□□ -0.76
APOBEC3F-201ENST00000308521 JCHAINP01591 159 aa10.29□□□□□ -0.76
APOBEC3F-201ENST00000308521 ENDOUP21128 410 aaKnown RBP10.29□□□□□ -0.76
APOBEC3F-201ENST00000308521 PCYT1AP49585 367 aa10.29□□□□□ -0.76
APOBEC3F-201ENST00000308521 ENTPD1P49961 510 aa10.29□□□□□ -0.76
APOBEC3F-201ENST00000308521 NDST2P52849 883 aa10.29□□□□□ -0.76
APOBEC3F-201ENST00000308521 DNAJB13P59910 316 aa10.29□□□□□ -0.76
APOBEC3F-201ENST00000308521 SQLEQ14534 574 aa10.29□□□□□ -0.76
APOBEC3F-201ENST00000308521 ZBED5Q49AG3 693 aa10.29□□□□□ -0.76
APOBEC3F-201ENST00000308521 ALFQ53S48 1182 aa10.29□□□□□ -0.76
APOBEC3F-201ENST00000308521 NHSL2Q5HYW2 709 aa10.29□□□□□ -0.76
APOBEC3F-201ENST00000308521 RAP1GAP2Q684P5 730 aa10.29□□□□□ -0.76
APOBEC3F-201ENST00000308521 ELMSAN1Q6PJG2 1045 aa10.29□□□□□ -0.76
APOBEC3F-201ENST00000308521 HACD2Q6Y1H2 254 aa10.29□□□□□ -0.76
APOBEC3F-201ENST00000308521 HERC6Q8IVU3 1022 aa10.29□□□□□ -0.76
APOBEC3F-201ENST00000308521 FSTL5Q8N475 847 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms