RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 BRINP1O60477 761 aa26.28■■□□□ 1.8
CDKN2A-201ENST00000304494 PMPCBO75439 489 aa26.28■■□□□ 1.8
CDKN2A-201ENST00000304494 PNLIPP16233 465 aa26.28■■□□□ 1.8
CDKN2A-201ENST00000304494 ADCY8P40145 1251 aa26.28■■□□□ 1.8
CDKN2A-201ENST00000304494 HLTFQ14527 1009 aaKnown RBP eCLIP26.28■■□□□ 1.8
CDKN2A-201ENST00000304494 CERCAMQ5T4B2 595 aa26.28■■□□□ 1.8
CDKN2A-201ENST00000304494 NRROSQ86YC3 692 aa26.28■■□□□ 1.8
CDKN2A-201ENST00000304494 LSMEM2Q8N112 164 aa26.28■■□□□ 1.8
CDKN2A-201ENST00000304494 SPC24Q8NBT2 197 aa26.28■■□□□ 1.8
CDKN2A-201ENST00000304494 OR2M4Q96R27 311 aa26.28■■□□□ 1.8
CDKN2A-201ENST00000304494 WDR24Q96S15 920 aa26.28■■□□□ 1.8
CDKN2A-201ENST00000304494 FERMT1Q9BQL6 677 aa26.28■■□□□ 1.8
CDKN2A-201ENST00000304494 APPL1Q9UKG1 709 aa26.28■■□□□ 1.8
CDKN2A-201ENST00000304494 TRHDEQ9UKU6 1024 aa26.28■■□□□ 1.8
CDKN2A-201ENST00000304494 TMEM98Q9Y2Y6 226 aa26.28■■□□□ 1.8
CDKN2A-201ENST00000304494 GPSM3Q9Y4H4 160 aa26.28■■□□□ 1.8
CDKN2A-201ENST00000304494 NTN3O00634 580 aaPredicted RBP26.27■■□□□ 1.8
CDKN2A-201ENST00000304494 NFKB1P19838 968 aa26.27■■□□□ 1.8
CDKN2A-201ENST00000304494 CD68P34810 354 aaPredicted RBP26.27■■□□□ 1.8
CDKN2A-201ENST00000304494 PTPN7P35236 360 aa26.27■■□□□ 1.8
CDKN2A-201ENST00000304494 ACTN2P35609 894 aa26.27■■□□□ 1.8
CDKN2A-201ENST00000304494 CTBSQ01459 385 aa26.27■■□□□ 1.8
CDKN2A-201ENST00000304494 KIF5AQ12840 1032 aa26.27■■□□□ 1.8
CDKN2A-201ENST00000304494 PID1Q7Z2X4 250 aa26.27■■□□□ 1.8
CDKN2A-201ENST00000304494 TRIM74Q86UV6 250 aa26.27■■□□□ 1.8
CDKN2A-201ENST00000304494 LRRC57Q8N9N7 239 aa26.27■■□□□ 1.8
CDKN2A-201ENST00000304494 ZDHHC1Q8WTX9 485 aa26.27■■□□□ 1.8
CDKN2A-201ENST00000304494 PTCD2Q8WV60 388 aaKnown RBP26.27■■□□□ 1.8
CDKN2A-201ENST00000304494 OSBPL8Q9BZF1 889 aa26.27■■□□□ 1.8
CDKN2A-201ENST00000304494 POLR1BQ9H9Y6 1135 aa26.27■■□□□ 1.8
CDKN2A-201ENST00000304494 TAAR2Q9P1P5 351 aa26.27■■□□□ 1.8
CDKN2A-201ENST00000304494 VPS18Q9P253 973 aa26.27■■□□□ 1.8
CDKN2A-201ENST00000304494 RABGEF1Q9UJ41 708 aa26.27■■□□□ 1.8
CDKN2A-201ENST00000304494 ZNF711Q9Y462 761 aa26.27■■□□□ 1.8
CDKN2A-201ENST00000304494 GRID2IPA4D2P6 1211 aa26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 NUDT21O43809 227 aaKnown RBP26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 ASMTLO95671 621 aa26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 LSSP48449 732 aa26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 DCDC1P59894 354 aa26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 GABREP78334 506 aa26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 NOMO1Q15155 1222 aa26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 TMC3Q7Z5M5 1100 aa26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 GALNT13Q8IUC8 556 aa26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 SYCE1Q8N0S2 351 aa26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 ZNF567Q8N184 647 aa26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 FCRL5Q96RD9 977 aa26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 GFM1Q96RP9 751 aaKnown RBP26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 GPR63Q9BZJ6 419 aa26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 SPATS2LQ9NUQ6 558 aaKnown RBP26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 UBP1Q9NZI7 540 aa26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 LRIT1Q9P2V4 623 aa26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 SHOC2Q9UQ13 582 aa26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 ENTPD2Q9Y5L3 495 aa26.26■■□□□ 1.79
CDKN2A-201ENST00000304494 A0A087WV48 116 aa26.25■■□□□ 1.79
CDKN2A-201ENST00000304494 H7C0C1 242 aa26.25■■□□□ 1.79
CDKN2A-201ENST00000304494 EPOP01588 193 aa26.25■■□□□ 1.79
CDKN2A-201ENST00000304494 MPOP05164 745 aa26.25■■□□□ 1.79
CDKN2A-201ENST00000304494 FGF1P05230 155 aa26.25■■□□□ 1.79
CDKN2A-201ENST00000304494 RPLP0P05388 317 aaKnown RBP26.25■■□□□ 1.79
CDKN2A-201ENST00000304494 PIRTP0C851 137 aa26.25■■□□□ 1.79
CDKN2A-201ENST00000304494 ATP5OP48047 213 aa26.25■■□□□ 1.79
CDKN2A-201ENST00000304494 LRP8Q14114 963 aa26.25■■□□□ 1.79
CDKN2A-201ENST00000304494 TBC1D25Q3MII6 688 aa26.25■■□□□ 1.79
CDKN2A-201ENST00000304494 PYCR3Q53H96 274 aa26.25■■□□□ 1.79
CDKN2A-201ENST00000304494 SLC30A9Q6PML9 568 aa26.25■■□□□ 1.79
CDKN2A-201ENST00000304494 MARK2Q7KZI7 788 aaKnown RBP26.25■■□□□ 1.79
CDKN2A-201ENST00000304494 CCNJLQ8IV13 435 aa26.25■■□□□ 1.79
CDKN2A-201ENST00000304494 EID2BQ96D98 161 aa26.25■■□□□ 1.79
CDKN2A-201ENST00000304494 NFKBIL1Q9UBC1 381 aaPredicted RBP26.25■■□□□ 1.79
CDKN2A-201ENST00000304494 CNOT6Q9ULM6 557 aaKnown RBP26.25■■□□□ 1.79
CDKN2A-201ENST00000304494 RNF215Q9Y6U7 377 aa26.25■■□□□ 1.79
CDKN2A-201ENST00000304494 CELSR3Q9NYQ7 3312 aa26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 ANKRD11Q6UB99 2663 aaPredicted RBP26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 LOC285095A0A1B0GVY8 99 aa26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 FADS2P1A8MWK0 482 aa26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 TJP3O95049 919 aa26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 AK4P27144 223 aaPredicted RBP26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 WNT3AP56704 352 aa26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 CCL7P80098 99 aa26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 KDELC1Q6UW63 502 aa26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 PEX26Q7Z412 305 aa26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 SNIP1Q8TAD8 396 aaKnown RBP26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 FGF11Q92914 225 aa26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 ATXN7L3BQ96GX2 97 aa26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 ZSCAN5AQ9BUG6 496 aa26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 SPATA16Q9BXB7 569 aa26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 LRRN3Q9H3W5 708 aa26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 RMI1Q9H9A7 625 aa26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 RSPH14Q9UHP6 348 aa26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 AMFRQ9UKV5 643 aa26.24■■□□□ 1.79
CDKN2A-201ENST00000304494 MACROD2A1Z1Q3 448 aa26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 TMX2-CTNND1H3BSU7 103 aa26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 RRP8O43159 456 aaKnown RBP26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 ZW10O43264 779 aa26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 DXOO77932 396 aaKnown RBP26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 SLC4A1P02730 911 aa26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 ACTR1BP42025 376 aa26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 ACTR1AP61163 376 aa26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 OTUD4Q01804 1114 aaKnown RBP26.23■■□□□ 1.79
CDKN2A-201ENST00000304494 MPP3Q13368 585 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms