RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 ZNF840PA6NDX5 716 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 C2orf81A6NN90 581 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 AZIN1O14977 448 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 NRP2O60462 931 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 STC2O76061 302 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 WISP3O95389 354 aaPredicted RBP15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 ZDHHC11BP0C7U3 371 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 CTPS1P17812 591 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 CHRM3P20309 590 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 PRDX3P30048 256 aaKnown RBP15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 MC4RP32245 332 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 ADGRE1Q14246 886 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 GK3PQ14409 553 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 RPS6KA2Q15349 733 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 HABP4Q5JVS0 413 aaKnown RBP15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 CLYBLQ8N0X4 340 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 TM6SF2Q9BZW4 377 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 C6orf203Q9P0P8 240 aaPredicted RBP15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 EPS15L1Q9UBC2 864 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 MYOCOSA0A1B0GUC4 107 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 RNASEH2AO75792 299 aaKnown RBP15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 BCAS2O75934 225 aaPredicted RBP15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 SNUPNO95149 360 aaKnown RBP15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 C1RP00736 705 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 CASP2P42575 452 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 KPNA1P52294 538 aaPredicted RBP15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 ZNF140P52738 457 aaPredicted RBP15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 CDH4P55283 916 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 CAPRIN1Q14444 709 aaKnown RBP15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 RBBP5Q15291 538 aaKnown RBP15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 TLR1Q15399 786 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 MAP7D1Q3KQU3 841 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 ATXN7L2Q5T6C5 722 aaPredicted RBP15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 OGFRL1Q5TC84 451 aaPredicted RBP15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 LARP4Q71RC2 724 aaKnown RBP eCLIP15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 LPGAT1Q92604 370 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 L3HYPDHQ96EM0 354 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 COMMD10Q9Y6G5 202 aa15.74■□□□□ 0.11
NCKIPSD-201ENST00000294129 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 H3BNC9 293 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 ACOT8O14734 319 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 ECI2O75521 394 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 PGM3O95394 542 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 PRLP01236 227 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 ITGB6P18564 788 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 ACVR1Q04771 509 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 LRP8Q14114 963 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 CYTH1Q15438 398 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 MAPRE2Q15555 327 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 C6orf52Q5T4I8 152 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 CWF19L1Q69YN2 538 aaKnown RBP15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 GALNT15Q8N3T1 639 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 AUTS2Q8WXX7 1259 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 ATOH8Q96SQ7 321 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 HBEGFQ99075 208 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 APPL1Q9UKG1 709 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 FCF1Q9Y324 198 aaKnown RBP15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 CASP8AP2Q9UKL3 1982 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 A0A0J9YYE9 177 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 A8MX80 341 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 EPOP01588 193 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 HSPA1AP0DMV8 641 aaKnown RBP15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 HSPA1BP0DMV9 641 aaKnown RBP15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 HGFP14210 728 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 MZF1P28698 734 aaPredicted RBP15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 CA8P35219 290 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 RAD51Q06609 339 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 FUNDC1Q8IVP5 155 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 PPWD1Q96BP3 646 aaKnown RBP15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 TRMOQ9BU70 441 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 TDRD1Q9BXT4 1180 aaKnown RBP15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 SPAG4Q9NPE6 437 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 NLE1Q9NVX2 485 aaPredicted RBP15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 BCAP29Q9UHQ4 241 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 RIMS3Q9UJD0 308 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 MED16Q9Y2X0 877 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 PCDHB9Q9Y5E1 797 aa15.73■□□□□ 0.11
NCKIPSD-201ENST00000294129 H0Y626 953 aa15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 STX7O15400 261 aaKnown RBP15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 TBC1D4O60343 1298 aa15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 HOXD10P28358 340 aa15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 ROR2Q01974 943 aaKnown RBP15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 CLCQ05315 142 aa15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 ELAVL2Q12926 359 aaKnown RBP15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 RBBP7Q16576 425 aa15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 AFTPHQ6ULP2 937 aa15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 AMIGO2Q86SJ2 522 aa15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 ACOX2Q99424 681 aa15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 SLC25A23Q9BV35 468 aa15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 UNC93B1Q9H1C4 597 aa15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 TUBB1Q9H4B7 451 aa15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 TRPM5Q9NZQ8 1165 aa15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 PDP2Q9P2J9 529 aa15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 CROTQ9UKG9 612 aa15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 SNX13Q9Y5W8 968 aa15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 E5RI56 91 aa15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 CASQ2O14958 399 aaPredicted RBP15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 KDELR3O43731 214 aa15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 TMCC1O94876 653 aa15.72■□□□□ 0.11
NCKIPSD-201ENST00000294129 SPATA31D3P0C874 917 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms