RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 ADAM2Q99965 735 aa12.42□□□□□ -0.42
BEST3-201ENST00000266661 AARSD1Q9BTE6 412 aaKnown RBP12.42□□□□□ -0.42
BEST3-201ENST00000266661 NOL11Q9H8H0 719 aaKnown RBP12.42□□□□□ -0.42
BEST3-201ENST00000266661 PDFQ9HBH1 243 aa12.42□□□□□ -0.42
BEST3-201ENST00000266661 CMTM6Q9NX76 183 aa12.42□□□□□ -0.42
BEST3-201ENST00000266661 CRYL1Q9Y2S2 319 aa12.42□□□□□ -0.42
BEST3-201ENST00000266661 NDUFAF1Q9Y375 327 aa12.42□□□□□ -0.42
BEST3-201ENST00000266661 PTGDR2Q9Y5Y4 395 aa12.42□□□□□ -0.42
BEST3-201ENST00000266661 MYO16Q9Y6X6 1858 aa12.42□□□□□ -0.42
BEST3-201ENST00000266661 A0A0J9YYE9 177 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 TMEM189-UBE2V1I3L0A0 370 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 AZIN1O14977 448 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 PIP5K1BO14986 540 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 CD3EAPO15446 510 aaKnown RBP12.41□□□□□ -0.42
BEST3-201ENST00000266661 RPP40O75818 363 aaKnown RBP12.41□□□□□ -0.42
BEST3-201ENST00000266661 SIX3O95343 332 aaPredicted RBP12.41□□□□□ -0.42
BEST3-201ENST00000266661 COL6A1P12109 1028 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 CDH2P19022 906 aaPredicted RBP12.41□□□□□ -0.42
BEST3-201ENST00000266661 HLA-DPA1P20036 260 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 OGNP20774 298 aaKnown RBP12.41□□□□□ -0.42
BEST3-201ENST00000266661 ATP6V0D1P61421 351 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 PRAMEP78395 509 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 ITKQ08881 620 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 MAP7Q14244 749 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 TRIP4Q15650 581 aaPredicted RBP12.41□□□□□ -0.42
BEST3-201ENST00000266661 TRIM71Q2Q1W2 868 aaKnown RBP12.41□□□□□ -0.42
BEST3-201ENST00000266661 TMEM259Q4ZIN3 620 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 COQ5Q5HYK3 327 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 PITRM1Q5JRX3 1037 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 LCN8Q6JVE9 175 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 SCN4BQ8IWT1 228 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 PACRGLQ8N7B6 248 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 PCYOX1LQ8NBM8 494 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 TSPAN14Q8NG11 270 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 TWIST2Q8WVJ9 160 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 DNAJC1Q96KC8 554 aaKnown RBP12.41□□□□□ -0.42
BEST3-201ENST00000266661 BTN2A3PQ96KV6 586 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 NSUN5Q96P11 429 aaKnown RBP12.41□□□□□ -0.42
BEST3-201ENST00000266661 SP110Q9HB58 689 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 GMIPQ9P107 970 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 ATXN10Q9UBB4 475 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 GIMAP2Q9UG22 337 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 IKZF3Q9UKT9 509 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 SNX13Q9Y5W8 968 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 PDE4DIPQ5VU43 2346 aa12.41□□□□□ -0.42
BEST3-201ENST00000266661 A0A1B0GTL3 188 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 ZNF839A8K0R7 811 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 H3BSA7 217 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 UBXN8O00124 270 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 SOCS2O14508 198 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 PRAMEF11O60813 436 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 TIPRLO75663 272 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 GLP2RO95838 553 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 FGF1P05230 155 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 CKMT2P17540 419 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 SLC6A2P23975 617 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 CST5P28325 142 aaPredicted RBP12.4□□□□□ -0.42
BEST3-201ENST00000266661 PCSK6P29122 969 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 MAGEA11P43364 429 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 TUBA4AP68366 448 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 DDR2Q16832 855 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 PARP15Q460N3 678 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 SPATS1Q496A3 300 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 FAM26DQ5JW98 314 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 INTS11Q5TA45 600 aaKnown RBP12.4□□□□□ -0.42
BEST3-201ENST00000266661 OGFOD2Q6N063 350 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 PRMT9Q6P2P2 845 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 UBE2Q1Q7Z7E8 422 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 EPHX4Q8IUS5 362 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 PCSK9Q8NBP7 692 aaKnown RBP12.4□□□□□ -0.42
BEST3-201ENST00000266661 OR13C4Q8NGS5 318 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 GRIN3AQ8TCU5 1115 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 BRSK1Q8TDC3 778 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 TSPEARQ8WU66 669 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 KIAA1191Q96A73 305 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 HIC2Q96JB3 615 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 NSMCE3Q96MG7 304 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 CIB1Q99828 191 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 C1QTNF3Q9BXJ4 246 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 FBXO44Q9H4M3 255 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 STARD7Q9NQZ5 370 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.4□□□□□ -0.42
BEST3-201ENST00000266661 PHF24Q9UPV7 400 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 PCDHA9Q9Y5H5 950 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 GPR45Q9Y5Y3 372 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 ARL5AQ9Y689 179 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 KLK8O60259 260 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 TBX18O95935 607 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 FGFR3P22607 806 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 ACVRL1P37023 503 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 THPOP40225 353 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 STC1P52823 247 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 YBEYP58557 167 aaPredicted RBP12.4□□□□□ -0.42
BEST3-201ENST00000266661 STX1BP61266 288 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 LRRC26Q2I0M4 334 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 C5orf22Q49AR2 442 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 BLOC1S3Q6QNY0 202 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 ARHGAP22Q7Z5H3 698 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 ZNF280BQ86YH2 543 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 ADGRG5Q8IZF4 528 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms