RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 TRMT5Q32P41 509 aaKnown RBP16.81■□□□□ 0.28
CHKA-201ENST00000265689 CAMK1DQ8IU85 385 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 KIRREL3Q8IZU9 778 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 ST13P5Q8NFI4 369 aaPredicted RBP16.81■□□□□ 0.28
CHKA-201ENST00000265689 CFAP61Q8NHU2 1237 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 L3HYPDHQ96EM0 354 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 MAELQ96JY0 434 aaKnown RBP16.81■□□□□ 0.28
CHKA-201ENST00000265689 BIRC8Q96P09 236 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 CCDC68Q9H2F9 335 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 ARHGAP26Q9UNA1 814 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 SH3BP1Q9Y3L3 701 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 ASB3Q9Y575 518 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 MYOFQ9NZM1 2061 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 FZD6O60353 706 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 EFCAB14O75071 495 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 SMIM24O75264 130 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 SNUPNO95149 360 aaKnown RBP16.81■□□□□ 0.28
CHKA-201ENST00000265689 ALPIP09923 528 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 GKP32189 559 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 CDH13P55290 713 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 CCDC6Q16204 474 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 PTGR2Q8N8N7 351 aaPredicted RBP16.81■□□□□ 0.28
CHKA-201ENST00000265689 ACTRT2Q8TDY3 377 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 SLC22A17Q8WUG5 538 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 STON2Q8WXE9 905 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 EID2BQ96D98 161 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 TCF12Q99081 682 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 GPR21Q99679 349 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 SLC30A3Q99726 388 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 RTKNQ9BST9 563 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 TAS2R13Q9NYV9 303 aa16.81■□□□□ 0.28
CHKA-201ENST00000265689 CCDC189A1A4V9 331 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 RGSL1A5PLK6 1076 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 AIM2O14862 343 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 TBX10O75333 385 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 SIX3O95343 332 aaPredicted RBP16.8■□□□□ 0.28
CHKA-201ENST00000265689 C8AP07357 584 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 THRAP10827 490 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 MTHFD2P13995 350 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 ACTR3P61158 418 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 C6orf163Q5TEZ5 329 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 CLEC6AQ6EIG7 209 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 LILRA6Q6PI73 481 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 ATOH8Q96SQ7 321 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 TCF25Q9BQ70 676 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 EVLQ9UI08 416 aaPredicted RBP16.8■□□□□ 0.28
CHKA-201ENST00000265689 COPG1Q9Y678 874 aaKnown RBP16.8■□□□□ 0.28
CHKA-201ENST00000265689 SLC4A7Q9Y6M7 1214 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 PER2O15055 1255 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 CTNNB1P35222 781 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 HERVK_113P63132 956 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 SLC7A9P82251 487 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 HTRA4P83105 476 aaPredicted RBP16.8■□□□□ 0.28
CHKA-201ENST00000265689 NFKB2Q00653 900 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 LMAN2Q12907 356 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 PFKFB4Q16877 469 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 HTR3DQ70Z44 454 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 LYSMD3Q7Z3D4 306 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.8■□□□□ 0.28
CHKA-201ENST00000265689 ZNF570Q96NI8 536 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 CORO1BQ9BR76 489 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 ERVK-6Q9BXR3 956 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 HCFC1R1Q9NWW0 138 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 CDH22Q9UJ99 828 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 ZNF711Q9Y462 761 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 WASF2Q9Y6W5 498 aa16.8■□□□□ 0.28
CHKA-201ENST00000265689 PPP6CO00743 305 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 NIPSNAP2O75323 286 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 RFPL2O75678 378 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 BAIAP3O94812 1187 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 CREMQ03060 361 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 PPIGQ13427 754 aaKnown RBP eCLIP16.79■□□□□ 0.288e-7■■□□□ 13.3
CHKA-201ENST00000265689 CTSL3PQ5NE16 218 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 ZNF697Q5TEC3 545 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 TLDC1Q6P9B6 456 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 PGM2L1Q6PCE3 622 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 CEP70Q8NHQ1 597 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 NRG4Q8WWG1 115 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 MYO19Q96H55 970 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 C2orf49Q9BVC5 232 aaPredicted RBP16.79■□□□□ 0.28
CHKA-201ENST00000265689 TFB2MQ9H5Q4 396 aaKnown RBP16.79■□□□□ 0.28
CHKA-201ENST00000265689 TRAF6Q9Y4K3 522 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 CCL16O15467 120 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 PGLSO95336 258 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 CD70P32970 193 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 NUDT2P50583 147 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 GALNT1Q10472 559 aaPredicted RBP16.79■□□□□ 0.28
CHKA-201ENST00000265689 TBL3Q12788 808 aaKnown RBP16.79■□□□□ 0.28
CHKA-201ENST00000265689 CYLC2Q14093 348 aaPredicted RBP16.79■□□□□ 0.28
CHKA-201ENST00000265689 PPP1R3AQ16821 1122 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 ARMC12Q5T9G4 340 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 TAS2R42Q7RTR8 314 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 GPR65Q8IYL9 337 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 KREMEN2Q8NCW0 462 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 RHEBL1Q8TAI7 183 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 PIH1D2Q8WWB5 315 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 CCDC124Q96CT7 223 aaKnown RBP16.79■□□□□ 0.28
CHKA-201ENST00000265689 FAR2Q96K12 515 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 SLC46A2Q9BY10 475 aa16.79■□□□□ 0.28
CHKA-201ENST00000265689 GPR63Q9BZJ6 419 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms