RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 TRIP4Q15650 581 aaPredicted RBP17.06■□□□□ 0.32
SRF-201ENST00000265354 PIGGQ5H8A4 983 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 SLC7A5P1Q8MH63 180 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 OR2T12Q8NG77 320 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 SCAMP5Q8TAC9 235 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 BCO2Q9BYV7 579 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 CATSPERZQ9NTU4 200 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 CRLS1Q9UJA2 301 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 C3orf18Q9UK00 162 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 POLR3HQ9Y535 204 aaPredicted RBP17.06■□□□□ 0.32
SRF-201ENST00000265354 PARP4Q9UKK3 1724 aaKnown RBP17.05■□□□□ 0.32
SRF-201ENST00000265354 C10orf71Q711Q0 1435 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 VILLO15195 856 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 TBX1O43435 398 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 TNFRSF21O75509 655 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 ENO2P09104 434 aaPredicted RBP17.05■□□□□ 0.32
SRF-201ENST00000265354 RGS4P49798 205 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 IST1P53990 364 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 BNIP2Q12982 314 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 FAAH2Q6GMR7 532 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 CIR1Q86X95 450 aaPredicted RBP17.05■□□□□ 0.32
SRF-201ENST00000265354 UBE2J2Q8N2K1 259 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 METTL25Q8N6Q8 603 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 FBXO32Q969P5 355 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 SMARCD1Q96GM5 515 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 ZNF556Q9HAH1 456 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 SPON1Q9HCB6 807 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 SLC38A7Q9NVC3 462 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 CIDEBQ9UHD4 219 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 MYH9P35579 1960 aaKnown RBP17.05■□□□□ 0.32
SRF-201ENST00000265354 C7orf72A4D263 438 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 SNPHO15079 494 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 COQ9O75208 318 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 CYP3A5P20815 502 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 LHX1P48742 406 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 FSCN1Q16658 493 aaKnown RBP17.05■□□□□ 0.32
SRF-201ENST00000265354 PLPPR4Q7Z2D5 763 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 MCFD2Q8NI22 146 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 GAB3Q8WWW8 586 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 PDGFDQ9GZP0 370 aaPredicted RBP17.05■□□□□ 0.32
SRF-201ENST00000265354 TOR3AQ9H497 397 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 VTA1Q9NP79 307 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 TRPV5Q9NQA5 729 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.05■□□□□ 0.32
SRF-201ENST00000265354 IGSF9Q9P2J2 1179 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 HMX2A2RU54 273 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 CLDN25C9JDP6 229 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 CNPP09543 421 aaKnown RBP17.05■□□□□ 0.32
SRF-201ENST00000265354 TGFBIQ15582 683 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 EFL1Q7Z2Z2 1120 aaKnown RBP17.05■□□□□ 0.32
SRF-201ENST00000265354 TSSK3Q96PN8 268 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 TRIM54Q9BYV2 358 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 SMURF2Q9HAU4 748 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 SMPD4Q9NXE4 827 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 SPASTQ9UBP0 616 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 CDH9Q9ULB4 789 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 TPRKBQ9Y3C4 175 aa17.05■□□□□ 0.32
SRF-201ENST00000265354 GPR182O15218 404 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 DENRO43583 198 aaKnown RBP17.04■□□□□ 0.32
SRF-201ENST00000265354 CHRM5P08912 532 aaPredicted RBP17.04■□□□□ 0.32
SRF-201ENST00000265354 CD1EP15812 388 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 TBX4P57082 545 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 RAB39AQ14964 217 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 CEP295NLQ96MC4 621 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 HIPK3Q9H422 1215 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 ELOVL6Q9H5J4 265 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 PNMA8CA0A1B0GUJ8 204 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 A0A1W2PQ67 120 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 NPEPPSL1A6NEC2 478 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 H3BNH8 94 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 PSMD11O00231 422 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 ENPP3O14638 875 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 CD3EAPO15446 510 aaKnown RBP17.04■□□□□ 0.32
SRF-201ENST00000265354 DDNO94850 711 aaPredicted RBP17.04■□□□□ 0.32
SRF-201ENST00000265354 OR4F21O95013 312 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 TKTP29401 623 aaKnown RBP17.04■□□□□ 0.32
SRF-201ENST00000265354 HOXD12P35452 270 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 LILRA4P59901 499 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 MRPL28Q13084 256 aaKnown RBP17.04■□□□□ 0.32
SRF-201ENST00000265354 MAPRE1Q15691 268 aaKnown RBP17.04■□□□□ 0.32
SRF-201ENST00000265354 MEP1AQ16819 746 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 MTERF3Q96E29 417 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 PLOD2O00469 737 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 IDO1P14902 403 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 GSK3BP49841 420 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 DDR2Q16832 855 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 SPANXN2Q5MJ10 180 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 C14orf80Q86SX3 495 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 RIOX2Q8IUF8 465 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 TRPM4Q8TD43 1214 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 NAA50Q9GZZ1 169 aaKnown RBP17.04■□□□□ 0.32
SRF-201ENST00000265354 CLPBQ9H078 707 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 NUAK2Q9H093 628 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 TRMT13Q9NUP7 481 aaKnown RBP17.04■□□□□ 0.32
SRF-201ENST00000265354 USE1Q9NZ43 259 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 SH3BP4Q9P0V3 963 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 TCAF1Q9Y4C2 921 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 RRN3P2A6NIE6 340 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 G3V2L1 256 aa17.04■□□□□ 0.32
SRF-201ENST00000265354 GABBR2O75899 941 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms