RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 KDELC1Q6UW63 502 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 LIMS2Q7Z4I7 341 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 KREMEN2Q8NCW0 462 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 BHLHE22Q8NFJ8 381 aaPredicted RBP9.06□□□□□ -0.96
CKAP2-201ENST00000258607 DNAJC9Q8WXX5 260 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 PBXIP1Q96AQ6 731 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 FUBP3Q96I24 572 aaKnown RBP eCLIP9.06□□□□□ -0.96
CKAP2-201ENST00000258607 C8orf48Q96LL4 319 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 KIFC1Q9BW19 673 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 OXSMQ9NWU1 459 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 C15orf41Q9Y2V0 281 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 PCDHB12Q9Y5F1 795 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 RGSL1A5PLK6 1076 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 CAPN8A6NHC0 703 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 UNCXA6NJT0 531 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 UBDO15205 165 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 PSMG1O95456 288 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 GBAP04062 536 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 CLTBP09497 229 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 TPBGLP0DKB5 382 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 ETS2P15036 469 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 HNF4AP41235 474 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 POU4F1Q01851 419 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 CYLC2Q14093 348 aaPredicted RBP9.06□□□□□ -0.96
CKAP2-201ENST00000258607 TCEAL5Q5H9L2 206 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 TMEM31Q5JXX7 168 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 LY6G5CQ5SRR4 150 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 ASRGL1Q7L266 308 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 ARHGAP18Q8N392 663 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 MRPL9Q9BYD2 267 aaKnown RBP9.06□□□□□ -0.96
CKAP2-201ENST00000258607 EBF3Q9H4W6 596 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 NSUN3Q9H649 340 aaKnown RBP9.06□□□□□ -0.96
CKAP2-201ENST00000258607 PNPLA8Q9NP80 782 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 LSM7Q9UK45 103 aaKnown RBP9.06□□□□□ -0.96
CKAP2-201ENST00000258607 SNX13Q9Y5W8 968 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 GREB1Q4ZG55 1949 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 TRANK1O15050 2925 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 A0A1B0GVM2 712 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 KANSL1LA0AUZ9 987 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 TCAF2A6NFQ2 919 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 ANKRD66B4E2M5 251 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 CLASP2O75122 1294 aaKnown RBP9.06□□□□□ -0.96
CKAP2-201ENST00000258607 SLC25A14O95258 325 aaPredicted RBP9.06□□□□□ -0.96
CKAP2-201ENST00000258607 S1PR4O95977 384 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 SCNN1AP37088 669 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 RECQLP46063 649 aaPredicted RBP9.06□□□□□ -0.96
CKAP2-201ENST00000258607 GSSP48637 474 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 STX1BP61266 288 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 ABRQ12979 859 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 C4orf22Q6V702 233 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 CCNJLQ8IV13 435 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 LILRA3Q8N6C8 439 aaPredicted RBP9.06□□□□□ -0.96
CKAP2-201ENST00000258607 NRG4Q8WWG1 115 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 SPDL1Q96EA4 605 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 MED8Q96G25 268 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 TMEM74Q96NL1 305 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 FEM1AQ9BSK4 669 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 HGH1Q9BTY7 390 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 TRIM62Q9BVG3 475 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 TMEM248Q9NWD8 314 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 MBD1Q9UIS9 605 aaPredicted RBP9.06□□□□□ -0.96
CKAP2-201ENST00000258607 COPG1Q9Y678 874 aaKnown RBP9.06□□□□□ -0.96
CKAP2-201ENST00000258607 DGKBQ9Y6T7 804 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 MIA3Q5JRA6 1907 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 SAC3D1A6NKF1 404 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 UBFD1O14562 309 aaKnown RBP9.05□□□□□ -0.96
CKAP2-201ENST00000258607 PRAMEF11O60813 436 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 ALDH1A2O94788 518 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 IPO13O94829 963 aaKnown RBP9.05□□□□□ -0.96
CKAP2-201ENST00000258607 KLHL2O95198 593 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 NDST3O95803 873 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 B3GALT4O96024 378 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 ATXN1LP0C7T5 689 aaKnown RBP9.05□□□□□ -0.96
CKAP2-201ENST00000258607 DGKQP52824 942 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 SH3BP2P78314 561 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 CCDC153Q494R4 210 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 STEAP4Q687X5 459 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 IL27RAQ6UWB1 636 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 SERPINA13PQ6UXR4 307 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 FNDC5Q8NAU1 212 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 PNPT1Q8TCS8 783 aaKnown RBP9.05□□□□□ -0.96
CKAP2-201ENST00000258607 POF1BQ8WVV4 589 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 ULK4Q96C45 1275 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 CNBD2Q96M20 576 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 ZSWIM3Q96MP5 696 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 C7orf26Q96N11 449 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 KLHL32Q96NJ5 620 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 SPATA16Q9BXB7 569 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 SLC46A2Q9BY10 475 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 CLPBQ9H078 707 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 KLQ9UEF7 1012 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 TRAF6Q9Y4K3 522 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 EP300Q09472 2414 aaPredicted RBP9.05□□□□□ -0.96
CKAP2-201ENST00000258607 TRBV23OR9-2A0A075B6M9 112 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 ZNF839A8K0R7 811 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 PEX11BO96011 259 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 MPOP05164 745 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 SERPINA6P08185 405 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 PAX7P23759 505 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 CCND1P24385 295 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms