RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 MYBPHLA2RUH7 354 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 TRBC1P01850 177 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 DHDDSQ86SQ9 333 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 SPPL2CQ8IUH8 684 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 TNFRSF25Q93038 417 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 INTS7Q9NVH2 962 aaKnown RBP18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 AK5Q9Y6K8 562 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 SIN3BO75182 1162 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 RPP40O75818 363 aaKnown RBP18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 C4BPBP20851 252 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 TNFRSF8P28908 595 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 POTEHQ6S545 545 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 ARCQ7LC44 396 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 LMLNQ96KR4 655 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 LRMDAQ9H2I8 198 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 GALNT8Q9NY28 637 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 ADGRE2Q9UHX3 823 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 TMEM88BA6NKF7 163 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 MCIDASD6RGH6 385 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 DMPKQ09013 629 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 PCBP1Q15365 356 aaKnown RBP eCLIP18.64■□□□□ 0.572e-12■□□□□ 8.4
SMARCC1-201ENST00000254480 PLEKHG4Q58EX7 1191 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 ZNF563Q8TA94 476 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 HSPA7P48741 367 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 NRLP54845 237 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 NAE1Q13564 534 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 SH3PXD2AQ5TCZ1 1133 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 TFAP2BQ92481 460 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 UPF1Q92900 1129 aaKnown RBP eCLIP18.63■□□□□ 0.573e-8■■■■□ 23.8
SMARCC1-201ENST00000254480 PLEKHG4BQ96PX9 1271 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 CLEC4MQ9H2X3 399 aaPredicted RBP18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 TTC24A2A3L6 582 aaPredicted RBP18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 URADA6NGE7 173 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 H3BM21 787 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 ATP6V0D1P61421 351 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 SLC1A5Q15758 541 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 INTS6LQ5JSJ4 861 aaKnown RBP18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 TXNDC11Q6PKC3 985 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 PHYKPLQ8IUZ5 450 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 SPPL2BQ8TCT7 592 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 SCLYQ96I15 445 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 SLC38A2Q96QD8 506 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 LHX5Q9H2C1 402 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 BCAS3Q9H6U6 928 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 RASSF1Q9NS23 344 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 MAP4K5Q9Y4K4 846 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 CLDN11O75508 207 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 FAM110CQ1W6H9 321 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 NAPRTQ6XQN6 538 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 STRADAQ7RTN6 431 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 XAGE5Q8WWM1 108 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 EBPLQ9BY08 206 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 NOL11Q9H8H0 719 aaKnown RBP18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 KPNA4O00629 521 aaPredicted RBP18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 NOL4O94818 638 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 ITGA1P56199 1179 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 PYDC2Q56P42 97 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 C17orf64Q86WR6 236 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 PRSS58Q8IYP2 241 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 PRKCGP05129 697 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 BPGMP07738 259 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 ATXN7L2Q5T6C5 722 aaPredicted RBP18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 PSMA8Q8TAA3 256 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 EXOSC8Q96B26 276 aaKnown RBP18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 RHOJQ9H4E5 214 aa18.63■□□□□ 0.57
SMARCC1-201ENST00000254480 TFPIP10646 304 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 YAP1P46937 504 aaKnown RBP18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 CYP4F8P98187 520 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 MON1BQ7L1V2 547 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 LRRC49Q8IUZ0 686 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 ACMSDQ8TDX5 336 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 RTP1P59025 263 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 GRM3Q14832 879 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 CCNYL2Q5T2Q4 361 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 IRGCQ6NXR0 463 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 FUT10Q6P4F1 479 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 TAC4Q86UU9 113 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 SLC9A6Q92581 669 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 PMEPA1Q969W9 287 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 LMAN2LQ9H0V9 348 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 TBC1D30Q9Y2I9 924 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 SOWAHBA6NEL2 793 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 MAGP20916 626 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 NMBRP28336 390 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 CLK3P49761 638 aaKnown RBP18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 VPS26BQ4G0F5 336 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 SLC4A11Q8NBS3 891 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 OR52J3Q8NH60 311 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 ARNTL2Q8WYA1 636 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 TMEM131LA2VDJ0 1609 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 LIN7AO14910 233 aaPredicted RBP18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 SUV39H1O43463 412 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 OR5F1O95221 314 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 APODP05090 189 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 IDO1P14902 403 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 CPTPQ5TA50 214 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 RPTNQ6XPR3 784 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 STON1Q9Y6Q2 735 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 IL12RB1P42701 662 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 MBTD1Q05BQ5 628 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms