RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 CLEC14AQ86T13 490 aa16.94■□□□□ 0.3
CDKN1A-201ENST00000244741 CAMK1DQ8IU85 385 aa16.94■□□□□ 0.3
CDKN1A-201ENST00000244741 CHPFQ8IZ52 775 aa16.94■□□□□ 0.3
CDKN1A-201ENST00000244741 SLC25A41Q8N5S1 370 aa16.94■□□□□ 0.3
CDKN1A-201ENST00000244741 ZNF513Q8N8E2 541 aaPredicted RBP16.94■□□□□ 0.3
CDKN1A-201ENST00000244741 MRGPRX2Q96LB1 330 aa16.94■□□□□ 0.3
CDKN1A-201ENST00000244741 MCMBPQ9BTE3 642 aa16.94■□□□□ 0.3
CDKN1A-201ENST00000244741 FICDQ9BVA6 458 aa16.94■□□□□ 0.3
CDKN1A-201ENST00000244741 STN1Q9H668 368 aaKnown RBP16.94■□□□□ 0.3
CDKN1A-201ENST00000244741 ZDHHC6Q9H6R6 413 aa16.94■□□□□ 0.3
CDKN1A-201ENST00000244741 SLC2A4RGQ9NR83 387 aa16.94■□□□□ 0.3
CDKN1A-201ENST00000244741 POLR3BQ9NW08 1133 aaPredicted RBP16.94■□□□□ 0.3
CDKN1A-201ENST00000244741 STOML1Q9UBI4 398 aa16.94■□□□□ 0.3
CDKN1A-201ENST00000244741 SOX13Q9UN79 622 aa16.94■□□□□ 0.3
CDKN1A-201ENST00000244741 SORCS3Q9UPU3 1222 aa16.94■□□□□ 0.3
CDKN1A-201ENST00000244741 G3V2L1 256 aa16.93■□□□□ 0.3
CDKN1A-201ENST00000244741 MPOP05164 745 aa16.93■□□□□ 0.3
CDKN1A-201ENST00000244741 C2P06681 752 aa16.93■□□□□ 0.3
CDKN1A-201ENST00000244741 WNT3AP56704 352 aa16.93■□□□□ 0.3
CDKN1A-201ENST00000244741 CCDC6Q16204 474 aa16.93■□□□□ 0.3
CDKN1A-201ENST00000244741 NAPRTQ6XQN6 538 aa16.93■□□□□ 0.3
CDKN1A-201ENST00000244741 SCUBE1Q8IWY4 988 aa16.93■□□□□ 0.3
CDKN1A-201ENST00000244741 OR2AP1Q8NGE2 309 aa16.93■□□□□ 0.3
CDKN1A-201ENST00000244741 OR2A12Q8NGT7 310 aa16.93■□□□□ 0.3
CDKN1A-201ENST00000244741 DTX3LQ8TDB6 740 aa16.93■□□□□ 0.3
CDKN1A-201ENST00000244741 NRG4Q8WWG1 115 aa16.93■□□□□ 0.3
CDKN1A-201ENST00000244741 FAM3CQ92520 227 aa16.93■□□□□ 0.3
CDKN1A-201ENST00000244741 SMIM14Q96QK8 99 aa16.93■□□□□ 0.3
CDKN1A-201ENST00000244741 THTPAQ9BU02 230 aa16.93■□□□□ 0.3
CDKN1A-201ENST00000244741 FSD1LQ9BXM9 530 aa16.93■□□□□ 0.3
CDKN1A-201ENST00000244741 C8orf33Q9H7E9 229 aaPredicted RBP16.93■□□□□ 0.3
CDKN1A-201ENST00000244741 MUTYHQ9UIF7 546 aa16.93■□□□□ 0.3
CDKN1A-201ENST00000244741 TM7SF2O76062 418 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 ASLP04424 464 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 SERPINF2P08697 491 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 GCKP35557 465 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 ABL2P42684 1182 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 CCNHP51946 323 aaPredicted RBP16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 CDH17Q12864 832 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 EIF4HQ15056 248 aaKnown RBP16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 PTPRRQ15256 657 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 TMEM196Q5HYL7 178 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 CACUL1Q86Y37 369 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 DNAJC28Q9NX36 388 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 FBXL21Q9UKT6 434 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 NCOR1O75376 2440 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 C19orf67A6NJJ6 358 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 MEI4A8MW99 385 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 TIMM44O43615 452 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 SIN3BO75182 1162 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 ANXA9O76027 345 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 IGSF6O95976 241 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 EPHX1P07099 455 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 SRPRAP08240 638 aaKnown RBP16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 PDHA1P08559 390 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 ALOX15P16050 662 aaPredicted RBP16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 CPOXP36551 454 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 CSE1LP55060 971 aaKnown RBP16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 GRSF1Q12849 480 aaKnown RBP eCLIP16.92■□□□□ 0.32e-6■■□□□ 12.4
CDKN1A-201ENST00000244741 GALNT3Q14435 633 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 DNAL1Q4LDG9 190 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 CARD16Q5EG05 197 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 KDELC1Q6UW63 502 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 ULK2Q8IYT8 1036 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 CFAP61Q8NHU2 1237 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 UCMAQ8WVF2 138 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 VPS39Q96JC1 886 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 BATF3Q9NR55 127 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 AAR2Q9Y312 384 aaKnown RBP16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 BDP1A6H8Y1 2624 aa16.92■□□□□ 0.3
CDKN1A-201ENST00000244741 ANKRD36A6QL64 1941 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 KRBA1A5PL33 1030 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 KLHL2O95198 593 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 KIR2DL1P43626 348 aaPredicted RBP16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 PGGT1BP53609 377 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 GEMP55040 296 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 SNRPD1P62314 119 aaKnown RBP16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 MXRA7P84157 204 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 SLC34A1Q06495 639 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 NSUN2Q08J23 767 aaKnown RBP eCLIP16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 TRAF2Q12933 501 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 MLF2Q15773 248 aaPredicted RBP16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 MYLK3Q32MK0 819 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 ALG1LQ6GMV1 187 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 NAPEPLDQ6IQ20 393 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 NCEH1Q6PIU2 408 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 NUDT18Q6ZVK8 323 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 KLHDC8BQ8IXV7 354 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 PAF1Q8N7H5 531 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 STMN2Q93045 179 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 FAM167BQ9BTA0 163 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 KIFC1Q9BW19 673 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 C1orf21Q9H246 121 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 NMRK1Q9NWW6 199 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 THAP10Q9P2Z0 257 aaPredicted RBP16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 MTF2Q9Y483 593 aaPredicted RBP16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 RAI2Q9Y5P3 530 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 USP34Q70CQ2 3546 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 A0A0U1RQS6 177 aa16.91■□□□□ 0.3
CDKN1A-201ENST00000244741 PIRTP0C851 137 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms