RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 MGARPQ8TDB4 240 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 DTX3LQ8TDB6 740 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 ECHDC3Q96DC8 303 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 ZNF778Q96MU6 729 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 FAM111AQ96PZ2 611 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 AGAP2Q99490 1192 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 PITPNM3Q9BZ71 974 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 CDH19Q9H159 772 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 FAM96AQ9H5X1 160 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 MANSC1Q9H8J5 431 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 RAD18Q9NS91 495 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 CATSPERZQ9NTU4 200 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 PCMTD2Q9NV79 361 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 APPL1Q9UKG1 709 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 INTS6Q9UL03 887 aaKnown RBP13.18□□□□□ -0.3
SLIRP-201ENST00000238688 CHKBQ9Y259 395 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 PI4KAP42356 2102 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 A0A096LPK6 155 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 CCDC163A0A0D9SF12 145 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 A0A0J9YYE9 177 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 FAM95CA0A1B0GW59 222 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 CAPN8A6NHC0 703 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 GOLGA8RI6L899 631 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 NPC1O15118 1278 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 STX7O15400 261 aaKnown RBP13.17□□□□□ -0.3
SLIRP-201ENST00000238688 CD3EAPO15446 510 aaKnown RBP13.17□□□□□ -0.3
SLIRP-201ENST00000238688 SNX3O60493 162 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 PLIN3O60664 434 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 EDF1O60869 148 aaKnown RBP13.17□□□□□ -0.3
SLIRP-201ENST00000238688 TRBC1P01850 177 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 DLDP09622 509 aaKnown RBP13.17□□□□□ -0.3
SLIRP-201ENST00000238688 TROVE2P10155 538 aaKnown RBP eCLIP13.17□□□□□ -0.3
SLIRP-201ENST00000238688 DGKGP49619 791 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 SUOXP51687 545 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 STC1P52823 247 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 NAA20P61599 178 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 SPEM2Q0P670 501 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 GALNT3Q14435 633 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 USP10Q14694 798 aaKnown RBP13.17□□□□□ -0.3
SLIRP-201ENST00000238688 LRRC14Q15048 493 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 RSPO4Q2I0M5 234 aaPredicted RBP13.17□□□□□ -0.3
SLIRP-201ENST00000238688 MYLK3Q32MK0 819 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 FBXO43Q4G163 708 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 CARD16Q5EG05 197 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 LINGO4Q6UY18 593 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 PRR23BQ6ZRT6 265 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 NUDT18Q6ZVK8 323 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 USP45Q70EL2 814 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 LRRC34Q8IZ02 419 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 PHTF2Q8N3S3 785 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 LPCAT1Q8NF37 534 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 RPLP0P6Q8NHW5 317 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 GDAP1Q8TB36 358 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 ZNF75CPQ92670 426 aaPredicted RBP13.17□□□□□ -0.3
SLIRP-201ENST00000238688 HDAC10Q969S8 669 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 CCDC126Q96EE4 140 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 CDKN2AIPNLQ96HQ2 116 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 C7orf26Q96N11 449 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 ACOT9Q9Y305 439 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 FCF1Q9Y324 198 aaKnown RBP13.17□□□□□ -0.3
SLIRP-201ENST00000238688 CEP192Q8TEP8 1941 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 PLXND1Q9Y4D7 1925 aa13.17□□□□□ -0.3
SLIRP-201ENST00000238688 TSPAN11A1L157 253 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 ATG13O75143 517 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 PIAS1O75925 651 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 C2P06681 752 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 BPGMP07738 259 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 RETP07949 1114 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 HNRNPLP14866 589 aaKnown RBP eCLIP13.16□□□□□ -0.3
SLIRP-201ENST00000238688 ZNF30P17039 623 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 SERPINB5P36952 375 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 HK2P52789 917 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 GPR33Q49SQ1 333 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 FASTKD1Q53R41 847 aaKnown RBP13.16□□□□□ -0.3
SLIRP-201ENST00000238688 FAM182AQ5T1J6 154 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 MBLAC2Q68D91 279 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 KLC3Q6P597 504 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 SYT13Q7L8C5 426 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 ERMP1Q7Z2K6 904 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 KDELC2Q7Z4H8 507 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 ADIPOR2Q86V24 386 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 HOMEZQ8IX15 550 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 ETFBKMTQ8IXQ9 262 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 TTC30BQ8N4P2 665 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 FAM160A2Q8N612 972 aaPredicted RBP13.16□□□□□ -0.3
SLIRP-201ENST00000238688 PIH1D2Q8WWB5 315 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 GAB3Q8WWW8 586 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 DNAJC1Q96KC8 554 aaKnown RBP13.16□□□□□ -0.3
SLIRP-201ENST00000238688 EXOC2Q96KP1 924 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 HHIPQ96QV1 700 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 MCCC1Q96RQ3 725 aaPredicted RBP13.16□□□□□ -0.3
SLIRP-201ENST00000238688 PAIP2Q9BPZ3 127 aaKnown RBP13.16□□□□□ -0.3
SLIRP-201ENST00000238688 NFKBIL1Q9UBC1 381 aaPredicted RBP13.16□□□□□ -0.3
SLIRP-201ENST00000238688 DKK3Q9UBP4 350 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 SLC2A6Q9UGQ3 507 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 GGT7Q9UJ14 662 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 MTO1Q9Y2Z2 717 aaKnown RBP13.16□□□□□ -0.3
SLIRP-201ENST00000238688 ZNF711Q9Y462 761 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 PCDHB9Q9Y5E1 797 aa13.16□□□□□ -0.3
SLIRP-201ENST00000238688 PCDHGC4Q9Y5F7 938 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms