RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 ZFYVE1Q9HBF4 777 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 ARNT2Q9HBZ2 717 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 TMEM98Q9Y2Y6 226 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 BPTFQ12830 3046 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 LMO7DNF2Z398 122 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 TNFRSF10CO14798 259 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 GPR39O43194 453 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 AQP9O43315 295 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 DNAJC6O75061 913 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 LDOC1O95751 146 aaPredicted RBP13.65□□□□□ -0.22
VEGFA-201ENST00000230480 GRIA1P42261 906 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 KCNJ1P48048 391 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 SNX1Q13596 522 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 PTK2BQ14289 1009 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 TCEA2Q15560 299 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 PARP6Q2NL67 630 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 DEFB133Q30KQ1 61 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 PRRT3Q5FWE3 981 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 TTC27Q6P3X3 843 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 DRICH1Q6PGQ1 229 aaPredicted RBP13.65□□□□□ -0.22
VEGFA-201ENST00000230480 HID1Q8IV36 788 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 TAB3Q8N5C8 712 aaPredicted RBP13.65□□□□□ -0.22
VEGFA-201ENST00000230480 PAF1Q8N7H5 531 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 CCDC97Q96F63 343 aaPredicted RBP13.65□□□□□ -0.22
VEGFA-201ENST00000230480 APOLD1Q96LR9 279 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 CDC6Q99741 560 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 ADGRE3Q9BY15 652 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 FAM83DQ9H4H8 585 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 WDR26Q9H7D7 661 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 BPIFA1Q9NP55 256 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 IL26Q9NPH9 171 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 NLGN3Q9NZ94 848 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 APOBEC3BQ9UH17 382 aaKnown RBP13.65□□□□□ -0.22
VEGFA-201ENST00000230480 KLK13Q9UKR3 277 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 NEU2Q9Y3R4 380 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 PIKFYVEQ9Y2I7 2098 aa13.65□□□□□ -0.22
VEGFA-201ENST00000230480 PRSS38A1L453 326 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 RGSL1A5PLK6 1076 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 PRR19A6NJB7 356 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 TPP1O14773 563 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 INPP4BO15327 924 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 FGGP02679 453 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 CKMT1AP12532 417 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 CA4P22748 312 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 ACP1P24666 158 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 RPL22P35268 128 aaKnown RBP13.64□□□□□ -0.23
VEGFA-201ENST00000230480 HMGCLP35914 325 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 CETN2P41208 172 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 GPR1P46091 355 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 GEMP55040 296 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 XIAPP98170 497 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 FOXC1Q12948 553 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 CCNG2Q16589 344 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 ZNF569Q5MCW4 686 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 SEL1L2Q5TEA6 688 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 RAET1GQ6H3X3 334 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 OGFOD3Q6PK18 319 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 XKR5Q6UX68 686 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 RD3Q7Z3Z2 195 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 C17orf82Q86X59 251 aaPredicted RBP13.64□□□□□ -0.23
VEGFA-201ENST00000230480 SLC35F3Q8IY50 421 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 NDUFAF2Q8N183 169 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 GPBAR1Q8TDU6 330 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 ETNK1Q9HBU6 452 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 ARFGAP3Q9NP61 516 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 SPATS2LQ9NUQ6 558 aaKnown RBP13.64□□□□□ -0.23
VEGFA-201ENST00000230480 KLQ9UEF7 1012 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 SUFUQ9UMX1 484 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 DRG1Q9Y295 367 aaKnown RBP13.64□□□□□ -0.23
VEGFA-201ENST00000230480 ASPMQ8IZT6 3477 aa13.64□□□□□ -0.23
VEGFA-201ENST00000230480 ZNF185O15231 689 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 LDB2O43679 373 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 CEP104O60308 925 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 NOBOXO60393 691 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 ANXA9O76027 345 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 RASGRP1O95267 797 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 EML2O95834 649 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 IVLP07476 585 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 CKMT2P17540 419 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 HLA-DPA1P20036 260 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 PSMA3P25788 255 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 DCDC1P59894 354 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 DMTNQ08495 405 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 CAMK2BQ13554 666 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 PYCR3Q53H96 274 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 PERM1Q5SV97 790 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 ALS2CLQ60I27 953 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 ITPRIPL1Q6GPH6 555 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 C17orf53Q8N3J3 647 aaPredicted RBP13.63□□□□□ -0.23
VEGFA-201ENST00000230480 PDCD7Q8N8D1 485 aaKnown RBP13.63□□□□□ -0.23
VEGFA-201ENST00000230480 HIC2Q96JB3 615 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 ALS2CR12Q96Q35 445 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 SCNM1Q9BWG6 230 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 CYP4F12Q9HCS2 524 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 HAUS2Q9NVX0 235 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 KCTD5Q9NXV2 234 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 SPASTQ9UBP0 616 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 FTSJ1Q9UET6 329 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 RABGEF1Q9UJ41 708 aa13.63□□□□□ -0.23
VEGFA-201ENST00000230480 TTC7AQ9ULT0 858 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms