RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 ACE2Q9BYF1 805 aaPredicted RBP10.53□□□□□ -0.72
TRPS1-201ENST00000220888 KHDRBS3O75525 346 aaKnown RBP10.52□□□□□ -0.72
TRPS1-201ENST00000220888 RSL1D1O76021 490 aaKnown RBP10.52□□□□□ -0.72
TRPS1-201ENST00000220888 NRG3P56975 720 aa10.52□□□□□ -0.72
TRPS1-201ENST00000220888 YBEYP58557 167 aaPredicted RBP10.52□□□□□ -0.72
TRPS1-201ENST00000220888 DLG4P78352 724 aa10.52□□□□□ -0.72
TRPS1-201ENST00000220888 SPIRE1Q08AE8 756 aa10.52□□□□□ -0.72
TRPS1-201ENST00000220888 SLC25A52Q3SY17 297 aa10.52□□□□□ -0.72
TRPS1-201ENST00000220888 KCTD4Q8WVF5 259 aa10.52□□□□□ -0.72
TRPS1-201ENST00000220888 MAML3Q96JK9 1138 aa10.52□□□□□ -0.72
TRPS1-201ENST00000220888 RNF121Q9H920 327 aa10.52□□□□□ -0.72
TRPS1-201ENST00000220888 CHMP1AQ9HD42 196 aaPredicted RBP10.52□□□□□ -0.72
TRPS1-201ENST00000220888 CDC42BPBQ9Y5S2 1711 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 OR2AG2A6NM03 316 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 TRAFD1O14545 582 aaPredicted RBP10.52□□□□□ -0.73
TRPS1-201ENST00000220888 SUV39H1O43463 412 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 ALADP13716 330 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 PCDH20Q8N6Y1 951 aaKnown RBP10.52□□□□□ -0.73
TRPS1-201ENST00000220888 UBASH3BQ8TF42 649 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 XAGE5Q8WWM1 108 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 KLK6Q92876 244 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 PLD4Q96BZ4 506 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 HIC2Q96JB3 615 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 SLC40A1Q9NP59 571 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 CD84Q9UIB8 345 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 ERCC6L2Q5T890 1561 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 ZNF541Q9H0D2 1346 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 MYO3AQ8NEV4 1616 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 B4DGG1 531 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 OR1F1O43749 312 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 RPP40O75818 363 aaKnown RBP10.52□□□□□ -0.73
TRPS1-201ENST00000220888 RHOQP17081 205 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 ACTR1BP42025 376 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 ACTR1AP61163 376 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 CACNG1Q06432 222 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 NAE1Q13564 534 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 LINGO4Q6UY18 593 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 PIWIL4Q7Z3Z4 852 aaKnown RBP10.52□□□□□ -0.73
TRPS1-201ENST00000220888 NARS2Q96I59 477 aaKnown RBP10.52□□□□□ -0.73
TRPS1-201ENST00000220888 LGMNQ99538 433 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 DSN1Q9H410 356 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 GLOD4Q9HC38 313 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRPS1-201ENST00000220888 ASB3Q9Y575 518 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 GMPPBQ9Y5P6 360 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 LOC100506127A0A0U1RQW1 187 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 TRIM64A6NGJ6 449 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 WASHC1A8K0Z3 465 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 WASH3PC4AMC7 463 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 LIN7AO14910 233 aaPredicted RBP10.52□□□□□ -0.73
TRPS1-201ENST00000220888 B3GALT2O43825 422 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 SNUPNO95149 360 aaKnown RBP10.52□□□□□ -0.73
TRPS1-201ENST00000220888 SNRPB2P08579 225 aaKnown RBP10.52□□□□□ -0.73
TRPS1-201ENST00000220888 JMJD7P0C870 316 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 ZCCHC18P0CG32 403 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 MNDAP41218 407 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 TOP3AQ13472 1001 aaPredicted RBP10.52□□□□□ -0.73
TRPS1-201ENST00000220888 MZT2BQ6NZ67 158 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 WASH2PQ6VEQ5 465 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 CERS6Q6ZMG9 384 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 CERS5Q8N5B7 392 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 ZMIZ2Q8NF64 920 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 OR4K2Q8NGD2 314 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 OR5B17Q8NGF7 314 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 IL31RAQ8NI17 732 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 EPS8L1Q8TE68 723 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 MYDGFQ969H8 173 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 TRIM63Q969Q1 353 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 EFHD2Q96C19 240 aaPredicted RBP10.52□□□□□ -0.73
TRPS1-201ENST00000220888 PCBD2Q9H0N5 130 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 DNAJC18Q9H819 358 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 NOD2Q9HC29 1040 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 SEC14L3Q9UDX4 400 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 HPSEQ9Y251 543 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 VWA7Q9Y334 891 aa10.52□□□□□ -0.73
TRPS1-201ENST00000220888 H0YGN5 161 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 AZIN1O14977 448 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 PDE5AO76074 875 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 CCL5P13501 91 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 SLC7A1P30825 629 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 APLP1P51693 650 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 AP1S1P61966 158 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 CTBP1Q13363 440 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 ZBTB6Q15916 424 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 FAM153CQ494X1 144 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 VARS2Q5ST30 1063 aaKnown RBP10.51□□□□□ -0.73
TRPS1-201ENST00000220888 PAPD7Q5XG87 772 aaKnown RBP10.51□□□□□ -0.73
TRPS1-201ENST00000220888 AVL9Q8NBF6 648 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 BCO2Q9BYV7 579 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 FAM192AQ9GZU8 254 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 OSBPL2Q9H1P3 480 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 KCNMB3Q9NPA1 279 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 CAPN14A8MX76 684 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 RGS20O76081 388 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 IFNA6P05013 189 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 RPL17P18621 184 aaKnown RBP10.51□□□□□ -0.73
TRPS1-201ENST00000220888 TSPAN8P19075 237 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 ATP5A1P25705 553 aaKnown RBP10.51□□□□□ -0.73
TRPS1-201ENST00000220888 GRIA4P48058 902 aa10.51□□□□□ -0.73
TRPS1-201ENST00000220888 PER3P56645 1201 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms