RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 SNRPB2P08579 225 aaKnown RBP12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 IVDP26440 423 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 CYP2C18P33260 490 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 GRK3P35626 688 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 TRIM32Q13049 653 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 MADCAM1Q13477 382 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 AARS2Q5JTZ9 985 aaKnown RBP12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 ATAD3BQ5T9A4 648 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 ZNF544Q6NX49 715 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 GALNT12Q8IXK2 581 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 ZNF567Q8N184 647 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 FNDC5Q8NAU1 212 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 ARRDC4Q8NCT1 418 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 FIG4Q92562 907 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 MRPL57Q9BQC6 102 aaKnown RBP12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 TXLNGYQ9BZA5 131 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 ADAM7Q9H2U9 754 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 DPEP3Q9H4B8 488 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 MINDY3Q9H8M7 445 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 STARD7Q9NQZ5 370 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 ANAPC2Q9UJX6 822 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 CDH9Q9ULB4 789 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 ING4Q9UNL4 249 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 PCNAP12004 261 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 CDH13P55290 713 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 MAXP61244 160 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 SLC25A11Q02978 314 aaKnown RBP12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 IL18R1Q13478 541 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 PRKD1Q15139 912 aaPredicted RBP12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 DDR2Q16832 855 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 MYLK3Q32MK0 819 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 ARL13AQ5H913 290 aaPredicted RBP12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 TAS1R3Q7RTX0 852 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 SLC22A16Q86VW1 577 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 FAM156AQ8NDB6 213 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 PPTC7Q8NI37 304 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 CLPBQ9H078 707 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 HMX1Q9NP08 348 aaPredicted RBP12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 RNF186Q9NXI6 227 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 IGSF9Q9P2J2 1179 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 DNAJB4Q9UDY4 337 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 RAD54BQ9Y620 910 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 COL11A1P12107 1806 aaPredicted RBP12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 DHRS12A0PJE2 317 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 TRAFD1O14545 582 aaPredicted RBP12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 ZNF682O95780 498 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 ZNF182P17025 639 aaPredicted RBP12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 NAT1P18440 290 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 SLC26A3P40879 764 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 CD86P42081 329 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 LRRC74AQ0VAA2 488 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 ZNF267Q14586 743 aaPredicted RBP12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 FSTL4Q6MZW2 842 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 PRMT9Q6P2P2 845 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 FAM35AQ86V20 835 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 PDSS2Q86YH6 399 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 HIPK1Q86Z02 1210 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 RELL1Q8IUW5 271 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 SETD9Q8NE22 299 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 METTL6Q8TCB7 284 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 CLEC4CQ8WTT0 213 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 LIMD1Q9UGP4 676 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 RAPGEFL1Q9UHV5 662 aa12.11□□□□□ -0.47
TSPAN9-201ENST00000011898 A0A0G2JPF8 293 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 HNRNPCL3B7ZW38 293 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 GNRH1P01148 92 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 HNRNPCL4P0DMR1 293 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 RXRGP48443 463 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 RHAGQ02094 409 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 SCRN3Q0VDG4 424 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 CDH18Q13634 790 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 TRIP4Q15650 581 aaPredicted RBP12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 FSCN1Q16658 493 aaKnown RBP12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 ZBED5Q49AG3 693 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 SPESP1Q6UW49 350 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 FAM126BQ8IXS8 530 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 LRRC17Q8N6Y2 441 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 PDPRQ8NCN5 879 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 OR52K2Q8NGK3 314 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 ZFP42Q96MM3 310 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 PANX3Q96QZ0 392 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 ZIC5Q96T25 663 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 GATA5Q9BWX5 397 aaPredicted RBP12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 STRA6Q9BX79 667 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 LSM7Q9UK45 103 aaKnown RBP12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 SLC13A4Q9UKG4 626 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 SLC9A8Q9Y2E8 581 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 DERAQ9Y315 318 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 STYXL1Q9Y6J8 313 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 FGF10O15520 208 aaPredicted RBP12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 PLOD3O60568 738 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 CYP7B1O75881 506 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 DARSP14868 501 aaKnown RBP12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 GNAZP19086 355 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 LMO2P25791 158 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 CCT8P50990 548 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 PCBP1Q15365 356 aaKnown RBP eCLIP12.1□□□□□ -0.472e-6■■■■■ 32.7
TSPAN9-201ENST00000011898 TTLL9Q3SXZ7 439 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 SLC39A12Q504Y0 691 aa12.1□□□□□ -0.47
TSPAN9-201ENST00000011898 CACHD1Q5VU97 1274 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms