RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Taf1Q80UV9 1891 aa13.21□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Kpna4O35343 521 aa13.21□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Spp1P10923 294 aaKnown RBP13.21□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 UtyP79457 1212 aa13.21□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Stxbp5lQ5DQR4 1185 aa13.21□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Six4Q61321 775 aa13.21□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Vsx2Q61412 361 aa13.21□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Sgo2Q7TSY8 1164 aa13.21□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Tmem121Q80XA0 318 aa13.21□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 TxlngQ8BHN1 524 aa13.21□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Gjc2Q8BQU6 440 aa13.21□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Rmdn2Q8BSE0 410 aa13.21□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Tspan8Q8R3G9 235 aa13.21□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 PudpQ9D5U5 234 aa13.21□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Nme7Q9QXL8 395 aa13.21□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Cacna1dQ99246 2179 aa13.21□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Lzts3A2AHG0 700 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 MttpO08601 894 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Ebf3O08791 596 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 LdhcP00342 332 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Coq10bQ3THF9 240 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Teddm1aQ810U2 305 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Rnf219Q8K2Y0 722 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Brd8Q8R3B7 951 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Tmco1Q921L3 188 aaKnown RBP13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Glod4Q9CPV4 298 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Il17rbQ9JIP3 499 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Nufip1Q9QXX8 484 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Rpl9-ps6A0A140T8T4 192 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Pdia2D3Z6P0 527 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Zbtb10E9Q8X5 861 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Gm8922F6XVS9 199 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 KlO35082 1014 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Limk2O54785 638 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Rpl9P51410 192 aaKnown RBP13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Tmem173Q3TBT3 378 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Prrt3Q6PE13 971 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 RragdQ7TT45 449 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Snx32Q80ZJ7 404 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Svs2Q8BS30 375 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Aph1bQ8C7N7 257 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Traf3ip2Q8N7N6 555 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Gjd3Q91YD1 278 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 RragcQ99K70 398 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Nck1Q99M51 377 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 EbplQ9D0P0 206 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Snx5Q9D8U8 404 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Irs2P81122 1321 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Gm45233A0A0N4SVE0 221 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 CkmP07310 381 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Impdh2P24547 514 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Klf1P46099 358 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Lrrn4clQ3TYX2 239 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Syce1lQ5D525 247 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 MogsQ80UM7 834 aaKnown RBP13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Cyth4Q80YW0 393 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Cpped1Q8BFS6 312 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 AW551984Q8BGF0 804 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Arhgap25Q8BYW1 648 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Adgrf1Q8VEC3 908 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Tmem174Q9DCX7 243 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Vnn3Q9QZ25 500 aa13.2□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Olfr1480A0A140LIR8 359 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Gm8879F6R3J9 157 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Svs4P18419 113 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 PenkP22005 268 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Pip5k1bP70181 539 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Itga1Q3V3R4 1179 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Glp2rQ5IXF8 512 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Olfr1355Q7TQU9 310 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Sfr1Q8BP27 319 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Nt5c1bQ91YE9 573 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Gins4Q99LZ3 223 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Ddx50Q99MJ9 734 aaKnown RBP13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Msgn1Q9JK54 188 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Stap1Q9JM90 297 aaKnown RBP13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Tdrd6P61407 2134 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 SmgcF6VRN1 385 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Gm8897L7N294 181 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 PargO88622 969 aaKnown RBP13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Stat5aP42230 793 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Cct8P42932 548 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Dsc2P55292 902 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 PamP97467 979 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Cyp3a13Q64464 503 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Ifi44Q8BV66 422 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Fbxo48Q8CAT8 161 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Trim61Q8JZK6 461 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Gstm4Q8R5I6 218 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Nxnl1Q8VC33 217 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Diras1Q91Z61 198 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Wdr55Q9CX97 388 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Rnf138rt1Q9D9M9 248 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Ralgps2Q9ERD6 590 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Extl1Q9JKV7 669 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Acsl4Q9QUJ7 711 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Padi3Q9Z184 664 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Pdzd7E9Q9W7 1021 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Kcng2F7A6P6 480 aa13.19□□□□□ -0.3
Pdgfra-205ENSMUST00000201711 Yme1l1O88967 715 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms