RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Vps4bP46467 444 aaKnown RBP30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Tas2r16P59529 299 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Rtel1Q0VGM9 1203 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Krt26Q3TRJ4 462 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 E330034G19RikQ3UWX6 351 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Garnl3Q3V0G7 1038 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Gbp4Q61107 620 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 PianpQ6P1B3 278 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Tmeff1Q6PFE7 372 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Prpf38bQ80SY5 542 aaKnown RBP30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Zfp454Q80Y34 536 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Sumf2Q8BPG6 308 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Dennd1aQ8K382 1016 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Olfr448Q8VES9 310 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Camk1gQ91VB2 477 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Gimap4Q99JY3 219 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 MtapQ9CQ65 283 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Cnbd2Q9D5U8 673 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Stap1Q9JM90 297 aaKnown RBP30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 PikfyveQ9Z1T6 2097 aa30.32■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 FscbA1EGX6 1074 aa30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 NuggcD3YWJ0 796 aa30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Gm7942L7N277 499 aa30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 P01636 108 aa30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Hoxb3P09026 433 aa30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Mdh1P14152 334 aa30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Tbxa2rP30987 341 aa30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 AcadmP45952 421 aaKnown RBP30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 SgcgP82348 291 aa30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Ggt1Q60928 568 aa30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Chmp2bQ8BJF9 213 aa30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Cgrrf1Q8BMJ7 332 aa30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Fmo9Q8C116 539 aa30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 P3h2Q8CG71 703 aa30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Sirt3Q8R104 334 aa30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Ssx2ipQ8VC66 615 aa30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Cd302Q9DCG2 228 aa30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Pias4Q9JM05 507 aa30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 IL36RNQ9QYY1 156 aa30.32■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Wdr90Q6ZPG2 1874 aa30.31■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Enthd1E9Q1Z2 618 aa30.31■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Klf6O08584 283 aa30.31■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Fpr1P33766 364 aa30.31■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Vsnl1P62761 191 aa30.31■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Irf4Q64287 450 aa30.31■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Spag7Q7TNE3 227 aaKnown RBP30.31■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Tmc7Q8C428 726 aa30.31■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Q8CEZ4 452 aa30.31■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Gm42417Q8K1D0 126 aa30.31■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Olfr459Q924H8 314 aa30.31■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Pgam1Q9DBJ1 254 aa30.31■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Trpv4Q9EPK8 871 aa30.31■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Igkv17-127A0A0G2JDN5 117 aa30.3■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Tekt5G5E8A8 557 aa30.3■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Clcn6O35454 870 aa30.3■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Sod2P09671 222 aa30.3■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Ap2m1P84091 435 aaKnown RBP30.3■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 B3gnt4Q1RLK6 350 aa30.3■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Pnliprp1Q5BKQ4 473 aa30.3■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Ccdc181Q80ZU5 509 aa30.3■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Gpr21Q8BX79 349 aa30.3■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Slitrk6Q8C110 840 aa30.3■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Acat2Q8CAY6 397 aa30.3■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Rhobtb1Q9DAK3 695 aa30.3■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Snx1Q9WV80 522 aa30.3■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Ajap1A2ALI5 412 aa30.29■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Pdk4O70571 412 aa30.29■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Olfm1O88998 485 aa30.29■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Tubb5P99024 444 aaKnown RBP30.29■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 ItgadQ3V0T4 1168 aa30.29■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 IpmkQ7TT16 396 aa30.29■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Gm3424L7N298 263 aa30.29■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Gm8246M0QWX9 263 aa30.29■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Hnrnpa2b1O88569 353 aaKnown RBP30.29■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Zbtb2Q3V3W4 514 aaKnown RBP30.29■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Gm7247Q6UY52 187 aa30.29■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Olfr594Q7TRR4 311 aa30.29■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Olfr1325Q8VF43 315 aa30.29■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Gm29133A0A1B0GT72 266 aa30.28■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 CdonQ32MD9 1250 aa30.28■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Uap1l1Q3TW96 507 aa30.28■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Fzd3Q61086 666 aa30.28■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Arl13bQ640N2 427 aa30.28■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Ripor1Q68FE6 1223 aa30.28■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 PapolgQ6PCL9 739 aa30.28■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Suds3Q8BR65 328 aa30.28■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Olfr808Q8VGI8 312 aa30.28■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 ArhgdiaQ99PT1 204 aaKnown RBP30.28■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 ToporslQ9D2F8 683 aa30.28■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Hsf2bpQ9D4G2 338 aa30.28■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Capn15Q9JLG8 1095 aa30.28■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Mroh5E9PUJ8 762 aa30.27■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Vmn2r59E9PUT5 865 aa30.27■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 AF366264G3X9P9 502 aa30.27■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Anp32eP97822 260 aaKnown RBP30.27■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Esrp1Q3US41 680 aaKnown RBP30.27■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Gm527Q4KL13 310 aa30.27■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Map2k2Q63932 401 aa30.27■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Krt73Q6NXH9 539 aa30.27■■■□□ 2.44
Ctdnep1-201ENSMUST00000108593 Q8BGK9 164 aa30.27■■■□□ 2.44
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms