RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 LcorlQ3U285 600 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Cyp4f37Q3V1F1 546 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gm3558Q5FWC9 205 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Arhgap30Q640N3 1101 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Tdpoz3Q717B4 365 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 FicdQ8BIX9 458 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Camk1dQ8BW96 385 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Serpina3bQ8BYY9 420 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 4933409G03RikQ8C5U0 320 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 BfarQ8R079 450 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Batf2Q8R1H8 277 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 TrirQ9D735 173 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Carm1Q9WVG6 608 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gria3Q9Z2W9 888 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 4921501E09RikA0A0R4J054 908 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gm21964A0A1W2P7S4 437 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Vmn2r120E9PX34 856 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Clec2lP0C7M9 211 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Pcbp1P60335 356 aaKnown RBP9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 SPINDOCQ05AH6 381 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Tmem173Q3TBT3 378 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Lrrc58Q3UGP9 366 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gm5800Q497L3 186 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Khdrbs1Q60749 443 aaKnown RBP9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 CapslQ6P8Y1 208 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Olfr667Q7TRP4 326 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Fstl5Q8BFR2 847 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cnpy4Q8BQ47 245 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Csnk1g1Q8BTH8 459 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Mrps2Q924T2 291 aaKnown RBP9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 MvdQ99JF5 401 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Lrrc18Q9CQ07 262 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cyb5r1Q9DB73 305 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ifi30Q9ESY9 248 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Il22Q9JJY9 179 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cyp4a12bA2A974 508 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Vmn2r67K7N6T2 851 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Vmn2r46L7N282 809 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Apoa4P06728 395 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Psmd7P26516 321 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Klrb1bP27812 223 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gpx3P46412 226 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cdkn2bP55271 130 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Hoxb13P70321 286 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 StacP97306 403 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Smpd1Q04519 627 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Alg6Q3TAE8 507 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Mocs1Q5RKZ7 636 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Fzd6Q61089 709 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 CcncQ62447 283 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Sept11Q8C1B7 431 aaKnown RBP9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Mab21L3Q8CI17 429 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Creb5Q8K1L0 357 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Nrbf2Q8VCQ3 287 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Olfr570Q8VH12 312 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Imp4Q8VHZ7 291 aaKnown RBP9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cyp4a12aQ91WL5 508 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Lims2Q91XD2 341 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Alpk2Q91ZB0 2144 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ankrd61Q9CQM6 421 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Shmt2Q9CZN7 504 aaKnown RBP9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Pinx1Q9CZX5 332 aaKnown RBP9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Q9D3J9 298 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Prg3Q9JL95 222 aa9.77□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Znf106O88466 1888 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gm28363A0A087WQW2 129 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gm5483B2RV77 97 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gm17175E9Q528 179 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gm10477F6SW83 55 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Slc9a3G3X939 829 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gm6614M0QWR8 670 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Limk2O54785 638 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Spp1P10923 294 aaKnown RBP9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 OsbpQ3B7Z2 805 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Rsrp1Q3UC65 298 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Avpr1aQ62463 423 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 SvoplQ6PDF3 494 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Fam83eQ80XS7 481 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 IfneQ80ZF2 192 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ifi205aQ8CGE8 404 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 FktnQ8R507 461 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gramd1aQ8VEF1 722 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 GneQ91WG8 722 aaKnown RBP9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 March2Q99M02 246 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gsk3bQ9WV60 420 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Plxna1P70206 1894 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Sult2b1O35400 338 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Igf2bp1O88477 577 aaKnown RBP9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Npr1P18293 1057 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Psmb9P28076 219 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Hddc2Q3SXD3 199 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Znf865Q3U3I9 1058 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 HexdcQ3U4H6 486 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Slc13a5Q67BT3 572 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gpr141Q7TQP0 305 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Olfr1198Q7TR12 308 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Sgo2Q7TSY8 1164 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ctxn3Q8BXZ0 80 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Pdcd2lQ8C5N5 364 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Adgrg3Q8R0T6 542 aa9.76□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms