RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 1810049J17RikQ3V2G9 153 aa10.27□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Insig1Q8BGI3 259 aa10.27□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Tmem74Q8BQU7 305 aa10.27□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Pitrm1Q8K411 1036 aaKnown RBP10.27□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Sh3glb2Q8R3V5 400 aa10.27□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Olfr541Q8VGM0 312 aa10.27□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Far1Q922J9 515 aa10.27□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Tspan1Q99J59 240 aa10.27□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Pacsin3Q99JB8 424 aa10.27□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Dus2Q9D7B1 493 aa10.27□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Clcn2Q9R0A1 908 aa10.27□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gm13119B1ARV5 481 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ccnb1ip1D3Z3K2 276 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 H2-M9O19442 342 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Zw10O54692 779 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Coro1aO89053 461 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 PrnpP04925 254 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Shmt1P50431 478 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cdc42P60766 191 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Rab26Q504M8 260 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Clec12aQ504P2 267 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Arhgap20Q6IFT4 1182 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Fndc3bQ6NWW9 1207 aaKnown RBP10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Prl3a1Q78Y73 227 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Arrdc3Q7TPQ9 414 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Nup54Q8BTS4 510 aaKnown RBP10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 B3gnt7Q8K0J2 397 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Trappc5Q9CQA1 188 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Bbs2Q9CWF6 721 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Chaf1bQ9D0N7 572 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Atad1Q9D5T0 361 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm28897A0A087WP44 222 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Fam151bD3YUE4 279 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Olfr596F8VQ26 312 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Sgo2bJ3QMK1 1167 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Neurod4O09105 330 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 H2-AaP01910 256 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 AlplP09242 524 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Nudt1P53368 156 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Bcl2a1Q07440 172 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Serpina3aQ6P4P1 422 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ubash3bQ8BGG7 638 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Q8BH50 245 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Bcas3Q8CCN5 928 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 MfrpQ8K480 584 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Epm2aip1Q8VEH5 606 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Mtif2Q91YJ5 727 aaKnown RBP10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Fundc1Q9DB70 155 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ulk2Q9QY01 1037 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ighv11-2A0A075B5R8 117 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Zfp963D3Z2T8 383 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Slc4a5E9Q3M5 1116 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Fbxw9F8VPX2 458 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Zfp607bG3X9H3 648 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 LatO54957 242 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Il3P01586 166 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Irf7P70434 457 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 ADGRF3Q58Y75 991 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Awat2Q6E1M8 333 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Man1c1Q6NXK9 625 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ints7Q7TQK1 966 aaKnown RBP10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tyw3Q8BSA9 257 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Pcdhgb5Q91XX5 926 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Actr3Q99JY9 418 aaKnown RBP10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 4930550L24RikQ99PA7 320 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gpn3Q9D3W4 284 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ubqln5Q9D4I8 510 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Paqr5Q9DCU0 330 aa10.27□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 4930402K13RikB1AW18 415 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Olfr1022L7MTT3 315 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Map2k3O09110 347 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Stmn3O70166 180 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Chrna4O70174 629 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Aif1O70200 147 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 E2f2P56931 443 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ctps1P70698 591 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tnfaip8l3Q3TBL6 204 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Mrm3Q5ND52 418 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Rabl6Q5U3K5 725 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Klra8Q60682 266 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tshz2Q68FE9 1030 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 IgflQ6B9Z0 140 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Olfr1505Q7TQQ2 316 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gadl1Q80WP8 550 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Teddm1bQ8CC62 306 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Rab15Q8K386 212 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Golm1Q91XA2 393 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Rnf146Q9CZW6 359 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Rnf138rt1Q9D9M9 248 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Eif4e3Q9DBB5 207 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Capn10Q9ESK3 666 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Trim30bE9PVL6 203 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cyp2b23E9Q593 491 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 1600015I10RikE9Q745 711 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm45837F7D3W5 961 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 BC024978J3QPC3 361 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cldn5O54942 218 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm5800Q497L3 186 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Jak2Q62120 1129 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Smpd4Q6ZPR5 823 aa10.26□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms