RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 GrifinQ9D1U0 144 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Mfsd10Q9D2V8 456 aaKnown RBP10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Ssxb6A2BI74 170 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Tex28B1AYN9 409 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Adh6aE9Q5Z6 375 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Gm8922F6XVS9 199 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Gm3755K7N743 167 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Vmn2r57L7N269 863 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 MttpO08601 894 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 NmbrO54799 390 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Eno2P17183 434 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 ThrbP37242 461 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Rhox5P52651 210 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 NfycP70353 335 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Dusp2Q05922 318 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 LcorlQ3U285 600 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Sema3cQ62181 751 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Znf280cQ6P3Y5 742 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Vmn1r191Q8K4D0 298 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 IlkapQ8R0F6 392 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Art3Q8R2G4 371 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Ndufs2Q91WD5 463 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Psmd13Q9WVJ2 376 aa10.65□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Urb1Q571H0 2274 aaKnown RBP10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 UprtB1AVZ0 310 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 S100zB9EJL3 99 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 D830030K20RikE9PYQ5 218 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Gm16506F7ANP4 213 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Gm3043K7N693 218 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Gm16440K7N6G6 218 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Gm2244L7N2A3 218 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Gm3278L7N2D2 218 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Gm8271L7N2E2 218 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 MntO08789 591 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Magea6O89010 325 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Cdh2P15116 906 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Hmgcs2P54869 508 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Snrpd2P62317 118 aaKnown RBP10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Traf6P70196 530 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Dnajb14Q149L6 379 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Cd300lgQ1ERP8 331 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Olfr325Q5NCD2 326 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Cd37Q61470 281 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 ToxQ66JW3 526 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Tmem151bQ68FE7 561 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Mbtd1Q6P5G3 631 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Olfr1085Q7TR64 313 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Xylt1Q811B1 953 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Fbxo48Q8CAT8 161 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Olfr1352Q8VGX5 309 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Mapk8Q91Y86 384 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 BollQ924M5 281 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 EbplQ9D0P0 206 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Ift27Q9D0P8 186 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 CenpkQ9ESN5 271 aa10.65□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Gm12394A2AKP6 982 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Gm8879F6R3J9 157 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Azin1O35484 448 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 P01740 135 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Ptger1P35375 405 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Pim3P58750 326 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Rabl6Q5U3K5 725 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Ca4Q64444 305 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Pfkfb4Q6DTY7 469 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Cnih3Q6ZWS4 160 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Trit1Q80UN9 467 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Q80Y73 168 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Gtf3c4Q8BMQ2 817 aaKnown RBP10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Adnp2Q8CHC8 1165 aaKnown RBP10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Ugt2b1Q8R084 529 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Vmn1r214Q8R279 367 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Slc35a5Q921R7 437 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 CmasQ99KK2 432 aaKnown RBP10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Mrpl15Q9CPR5 295 aaKnown RBP10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Itgb3bpQ9CQ82 176 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Det1Q9D0A0 550 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Snrnp48Q9D361 337 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Cldn22Q9D7U6 220 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Efhd2Q9D8Y0 240 aaKnown RBP10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Slc25a19Q9DAM5 318 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Spag6Q9JLI7 507 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Insl5Q9WUG6 135 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Slfn3A0A1L1STQ7 640 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 BC035947B2RQY6 695 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 D3Z070 196 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Olfr592E9PYB3 312 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Tmem44E9Q4M0 433 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 TazI7HJS2 263 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Gm5152L7N200 190 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Bub1O08901 1058 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 ClppO88696 272 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Ass1P16460 412 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 CratP47934 626 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Timm13P62075 95 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 SnrpfP62307 86 aaKnown RBP10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Ap5b1Q3TAP4 876 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Ccdc185Q3V118 621 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Avpr1aQ62463 423 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Dennd5aQ6PAL8 1287 aa10.64□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Pik3c3Q6PF93 887 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms