RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Gm3488M0QW81 238 aa16.83■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Pik3cdO35904 1043 aa16.83■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Matn4O89029 624 aa16.83■□□□□ 0.29
Ctcf-201ENSMUST00000005841 NrlP54846 237 aa16.83■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Kcnq1P97414 668 aa16.83■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Il6stQ00560 917 aa16.83■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Dnajc16Q80TN4 772 aa16.83■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Krr1Q8BGA5 380 aaKnown RBP16.83■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Fam210aQ8BGY7 273 aa16.83■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Brat1Q8C3R1 822 aa16.83■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Slc49a3Q8CE47 516 aa16.83■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Tas1r1Q99PG6 842 aa16.83■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Tmed10Q9D1D4 219 aaKnown RBP16.83■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Klf15Q9EPW2 415 aa16.83■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Dnajc12Q9R022 198 aa16.83■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Pagr1bF6V0H0 108 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Pax7P47239 503 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Tgtp2Q3T9E4 415 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Ms4a15Q3UPL6 245 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Fbxw11Q5SRY7 542 aaKnown RBP16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Tgtp1Q62293 415 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 ChfrQ810L3 664 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Tbl3Q8C4J7 801 aaKnown RBP16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Q8C4P0 716 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Txndc11Q8K2W3 948 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Timd2Q8R183 305 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Fbxw7Q8VBV4 629 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Acsf2Q8VCW8 615 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Rgs10Q9CQE5 181 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 PpidQ9CR16 370 aaKnown RBP16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Fundc2Q9D6K8 151 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 LactbQ9EP89 551 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Snap29Q9ERB0 260 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 NckipsdQ9ESJ4 714 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 AgkQ9ESW4 421 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Cylc1A0A1B0GR13 642 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Acot1O55137 419 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Hoxa9P09631 271 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Mex3cQ05A36 652 aaKnown RBP16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Serpina3gQ5I2A0 440 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Smpd4Q6ZPR5 823 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Sec22cQ8BXT9 303 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 AcppQ8CE08 381 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Olfr985Q8VGB4 311 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 AnkhQ9JHZ2 492 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Dnajb9Q9QYI6 222 aa16.83■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Znf143O70230 638 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Lpar1P61793 364 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Adamts1P97857 968 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Trim40Q3UWA4 246 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Zmat1Q3V0C1 714 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Defa17Q64016 82 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Fnip1Q68FD7 1165 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 CcnyQ8BGU5 341 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Olfr356Q8VFP5 315 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Olfr441Q8VFS5 310 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Q9D5Y0 588 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Cldn3Q9Z0G9 219 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Gm42688A0A0R3P9D1 673 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 ZfaP23607 742 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Psmb9P28076 219 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Grik2P39087 908 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Tmem247Q497K7 211 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Sez6l2Q4V9Z5 910 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 PtprrQ62132 656 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Gabra5Q8BHJ7 463 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 4932414N04RikQ8CEQ9 752 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Ttc4Q8R3H9 386 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Olfr447Q8VGP6 310 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Rpl34Q9D1R9 117 aaKnown RBP16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Cnbd2Q9D5U8 673 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Fam122aQ9DB52 284 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Spin2gA0A0N4SW15 236 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Bclaf3A2AG58 752 aaKnown RBP16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Gm3259D3YUK0 475 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 CrnnD3YUU6 520 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Spin2eJ3QNQ0 234 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Gm5724L7N264 670 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Clk4O35493 481 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 AxlQ00993 888 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Mcph1Q7TT79 822 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 AardQ811W1 167 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Trmt2bQ8BQJ6 493 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Galnt13Q8CF93 556 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Olfr352Q8VGJ9 315 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 MrgpreQ91ZB7 310 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Polr3eQ9CZT4 710 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Zfyve19Q9DAZ9 389 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Slco1a4Q9EP96 670 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Il22bQ9JJY8 179 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Nufip1Q9QXX8 484 aa16.82■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Gm45713A0A1B0GS68 446 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Mindy4b-psA0A1W2P7H6 457 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Slc28a1E9PXX9 648 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Il2P04351 169 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Il6raP22272 460 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 PthlhP22858 175 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Apobec1P51908 229 aaKnown RBP16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Nudt1P53368 156 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 PdxpP60487 292 aa16.81■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 35.1 ms