RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 MIA3Q5JRA6 1907 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 BDP1A6H8Y1 2624 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 A0A1B0GVT2 93 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 LOC285095A0A1B0GVY8 99 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 CFAP99D6REC4 459 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 PRAMEF26H0Y7S4 382 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 RASGRP1O95267 797 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 PRAMEF1O95521 474 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 C1SP09871 688 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 RALBP11234 206 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 LHCGRP22888 699 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 NMBRP28336 390 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 TAS2R38P59533 333 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 PDE1CQ14123 709 aaPredicted RBP5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 IRF4Q15306 451 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 PLK5Q496M5 336 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 TMEM52BQ4KMG9 183 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 DUPD1Q68J44 220 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 CEP128Q6ZU80 1094 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 LDB1Q86U70 411 aaPredicted RBP5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 TRAPPC5Q8IUR0 188 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 NAT14Q8WUY8 206 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 FAM136AQ96C01 138 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 ATXN7L3BQ96GX2 97 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 NUSAP1Q9BXS6 441 aaKnown RBP5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 IRF2BPLQ9H1B7 796 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 CASS4Q9NQ75 786 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 EIF2B3Q9NR50 452 aaKnown RBP5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 IARS2Q9NSE4 1012 aaKnown RBP5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 SUSD2Q9UGT4 822 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 MBD1Q9UIS9 605 aaPredicted RBP5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 SMG5Q9UPR3 1016 aaKnown RBP5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 DNAJC16Q9Y2G8 782 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 TCAF1Q9Y4C2 921 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 SMAPO00193 183 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 AREL1O15033 823 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 SNX2O60749 519 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 BPIP17213 487 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 MCM3P25205 808 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 CD27P26842 260 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 CD38P28907 300 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 CNR2P34972 360 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 MAGEA4P43358 317 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 SPINT3P49223 89 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 IFFO1Q0D2I5 559 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 NAA30Q147X3 362 aaPredicted RBP5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 BRD3Q15059 726 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 PLA2G4EQ3MJ16 856 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 TRIM61Q5EBN2 209 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 TSTD2Q5T7W7 516 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 Q6ZSR6 202 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 NLRP9Q7RTR0 991 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 HCAR2Q8TDS4 363 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 STYXQ8WUJ0 223 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 MFSD3Q96ES6 412 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 TRIM56Q9BRZ2 755 aaKnown RBP5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 CENPHQ9H3R5 247 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 L2HGDHQ9H9P8 463 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 FSCN3Q9NQT6 498 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 PRMT8Q9NR22 394 aaPredicted RBP5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 MBNL1Q9NR56 388 aaKnown RBP5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 APPL1Q9UKG1 709 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 ZFR2Q9UPR6 939 aaKnown RBP5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 PRKAB1Q9Y478 270 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 PCDHGA2Q9Y5H1 932 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 TLDC2A0PJX2 215 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 POC1B-GALNT4F8VUJ3 575 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 MAGEC1O60732 1142 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 ERLIN1O75477 346 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 ADRA1AP35348 466 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 STC1P52823 247 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 IL9RQ01113 521 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 C1orf61Q13536 156 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 CUL1Q13616 776 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 WSCD2Q2TBF2 565 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 ALG1LQ6GMV1 187 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 NEK5Q6P3R8 708 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 HEATR4Q86WZ0 1026 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 NAT8LQ8N9F0 302 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 GPR26Q8NDV2 337 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 MCUQ8NE86 351 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 CDKL2Q92772 493 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 TSACCQ96A04 125 aaPredicted RBP5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 ECHDC3Q96DC8 303 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 TRIB3Q96RU7 358 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 FRMD8Q9BZ67 464 aaPredicted RBP5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 OR2AG1Q9H205 316 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 KDM4CQ9H3R0 1056 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 SYNDIG1Q9H7V2 258 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 CYP4F12Q9HCS2 524 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 DOCK4Q8N1I0 1966 aa5.78□□□□□ -1.48
HNRNPU-220ENST00000639667 GPR179Q6PRD1 2367 aa5.77□□□□□ -1.49
HNRNPU-220ENST00000639667 COL6A3P12111 3177 aa5.77□□□□□ -1.49
HNRNPU-220ENST00000639667 TRBV23OR9-2A0A075B6M9 112 aa5.77□□□□□ -1.49
HNRNPU-220ENST00000639667 CCDC162PA2VCL2 907 aa5.77□□□□□ -1.49
HNRNPU-220ENST00000639667 POM121BA6NF01 834 aa5.77□□□□□ -1.49
HNRNPU-220ENST00000639667 KHNYNO15037 678 aaKnown RBP5.77□□□□□ -1.49
HNRNPU-220ENST00000639667 RAD51BO15315 384 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms