RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 SERINC1Q9NRX5 453 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 KCNH7Q9NS40 1196 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 CFAP97Q9P2B7 532 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 RAB26Q9ULW5 256 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 PCDHB3Q9Y5E6 796 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 DOCK11Q5JSL3 2073 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 A0A1W2PQC6 194 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 EYA4O95677 639 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 MMP14P50281 582 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 RAB7AP51149 207 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF41P51814 821 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-212ENST00000636194 NME5P56597 212 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 SPP2Q13103 211 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 SPANXN3Q5MJ09 141 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 PRAMEF17Q5VTA0 474 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 LAPTM4BQ86VI4 370 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 DNAJC10Q8IXB1 793 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 CHST13Q8NET6 341 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 ZSWIM3Q96MP5 696 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 HEPHQ9BQS7 1158 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 KAT8Q9H7Z6 458 aaKnown RBP6.01□□□□□ -1.45
SCN1A-212ENST00000636194 PNO1Q9NRX1 252 aaKnown RBP6.01□□□□□ -1.45
SCN1A-212ENST00000636194 TMEM39AQ9NV64 488 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 C2CD2Q9Y426 696 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 FAM240BA0A1B0GVZ2 78 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 ISPDA4D126 451 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 ZSCAN5BA6NJL1 495 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 PSMD9O00233 223 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 POLRMTO00411 1230 aaKnown RBP6.01□□□□□ -1.45
SCN1A-212ENST00000636194 IFNA7P01567 189 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 HK1P19367 917 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 BLKP51451 505 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 DEFA5Q01523 94 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 CDH17Q12864 832 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 AIMP2Q13155 320 aaKnown RBP6.01□□□□□ -1.45
SCN1A-212ENST00000636194 C19orf35Q6ZS72 473 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 C4orf33Q8N1A6 199 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 LRFN5Q96NI6 719 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 FAM118BQ9BPY3 351 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 NOD2Q9HC29 1040 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 MID1IP1Q9NPA3 183 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 OGTO15294 1046 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 LHCGRP22888 699 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF81P51508 661 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 PRKAG1P54619 331 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 MANFP55145 182 aaKnown RBP6.01□□□□□ -1.45
SCN1A-212ENST00000636194 PLEKHN1Q494U1 663 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-212ENST00000636194 CLEC4GQ6UXB4 293 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 ECHDC2Q86YB7 292 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 FEZF2Q8TBJ5 459 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 BRF2Q9HAW0 419 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 TRPV4Q9HBA0 871 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 ERVK-5Q9HDB9 667 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 SLC2A8Q9NY64 477 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 CYP26A1O43174 497 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 MSCO60682 206 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 CLPXO76031 633 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 SCGB1D2O95969 90 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 IFNA1P01562 189 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 FMO4P31512 558 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 SPIBQ01892 262 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 TNK2Q07912 1038 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 C2orf80Q0P641 193 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 DGCR6Q14129 220 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 BTG3Q14201 252 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-212ENST00000636194 RASA2Q15283 850 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 SLC18A3Q16572 532 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 ATAD3CQ5T2N8 411 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 OGFOD2Q6N063 350 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 SERPINA13PQ6UXR4 307 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 SATL1Q86VE3 508 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 DNASE1L2Q92874 299 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 SLC25A23Q9BV35 468 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 OSBPL3Q9H4L5 887 aa6.01□□□□□ -1.45
SCN1A-212ENST00000636194 CCL15-CCL14A0A0B4J2E2 113 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 DPPA5A6NC42 116 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 SH2B2O14492 632 aaPredicted RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 CYB561D2O14569 222 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 HCN1O60741 890 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 LARGE1O95461 756 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 LSM8O95777 96 aaKnown RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 MMP10P09238 476 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 ADD2P35612 726 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 GRIA2P42262 883 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 PSEN1P49768 467 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 CDH8P55286 799 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 TBX4P57082 545 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 PLGLB1Q02325 96 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 CCL15Q16663 113 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 TMEM44Q2T9K0 475 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 PDPK2PQ6A1A2 396 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 GPAT2Q6NUI2 795 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 TUBA3EQ6PEY2 450 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 LAS2Q8IYD9 372 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 ANKK1Q8NFD2 765 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 SELENOMQ8WWX9 145 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 SMARCD2Q92925 531 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 CLP1Q92989 425 aaKnown RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 TOP1MTQ969P6 601 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 FBXW5Q969U6 566 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms