RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 SLC2A12Q8TD20 617 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 ASB12Q8WXK4 309 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 HERVK_113Q902F9 699 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 AKAP1Q92667 903 aaKnown RBP eCLIP4.27□□□□□ -1.73
ATRX-209ENST00000623242 SYN2Q92777 582 aaPredicted RBP4.27□□□□□ -1.73
ATRX-209ENST00000623242 STAMQ92783 540 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 SECISBP2LQ93073 1101 aaKnown RBP4.27□□□□□ -1.73
ATRX-209ENST00000623242 BICD1Q96G01 975 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 RITA1Q96K30 269 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 CNOT6LQ96LI5 555 aaKnown RBP4.27□□□□□ -1.73
ATRX-209ENST00000623242 COG8Q96MW5 612 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 ACCSQ96QU6 501 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 NAPGQ99747 312 aaPredicted RBP4.27□□□□□ -1.73
ATRX-209ENST00000623242 GATA5Q9BWX5 397 aaPredicted RBP4.27□□□□□ -1.73
ATRX-209ENST00000623242 ADGRE3Q9BY15 652 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 KRTAP17-1Q9BYP8 105 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 NDST4Q9H3R1 872 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 R3HDMLQ9H3Y0 253 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 AZI2Q9H6S1 392 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 RMI1Q9H9A7 625 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 C17orf75Q9HAS0 396 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 PXMP2Q9NR77 195 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 TAB2Q9NYJ8 693 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 CYP39A1Q9NYL5 469 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 NRBP1Q9UHY1 535 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 GJD2Q9UKL4 321 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 GTF2A1LQ9UNN4 478 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 B3GNT3Q9Y2A9 372 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 PHIPQ8WWQ0 1821 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 GOLGA6L10A0A0M3HER8 536 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 GOLGA6L10A6NI86 522 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 RRN3P2A6NIE6 340 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 EIF3DO15371 548 aaKnown RBP eCLIP4.26□□□□□ -1.739e-8■■■□□ 14.7
ATRX-209ENST00000623242 CHMP2AO43633 222 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 TDP2O95551 362 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 AFPP02771 609 aaKnown RBP4.26□□□□□ -1.73
ATRX-209ENST00000623242 TFRCP02786 760 aaKnown RBP4.26□□□□□ -1.73
ATRX-209ENST00000623242 POLBP06746 335 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 CSF1P09603 554 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 HSPA1AP0DMV8 641 aaKnown RBP4.26□□□□□ -1.73
ATRX-209ENST00000623242 HSPA1BP0DMV9 641 aaKnown RBP4.26□□□□□ -1.73
ATRX-209ENST00000623242 ATP1A3P13637 1013 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 GPD1P21695 349 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 NR2F2P24468 414 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 CNTFP26441 200 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 CIITAP33076 1130 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 QARSP47897 775 aaKnown RBP4.26□□□□□ -1.73
ATRX-209ENST00000623242 CTCFP49711 727 aaPredicted RBP4.26□□□□□ -1.73
ATRX-209ENST00000623242 ZNF84P51523 738 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 HSD17B4P51659 736 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 CCR5P51681 352 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 PROK1P58294 105 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 CNTN2Q02246 1040 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 PRKCZQ05513 592 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 DMP1Q13316 513 aaPredicted RBP4.26□□□□□ -1.73
ATRX-209ENST00000623242 CBFBQ13951 182 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 MYBPC2Q14324 1141 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 GRB14Q14449 540 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 PGM5Q15124 567 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 SEC23BQ15437 767 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 ASIC2Q16515 512 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 EXOC3L4Q17RC7 722 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 KNOP1Q1ED39 458 aaKnown RBP4.26□□□□□ -1.73
ATRX-209ENST00000623242 ERCC6LQ2NKX8 1250 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 TBRG1Q3YBR2 411 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 WDR93Q6P2C0 686 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 INTS8Q75QN2 995 aaKnown RBP4.26□□□□□ -1.73
ATRX-209ENST00000623242 ARMCX2Q7L311 632 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 LRRTM4Q86VH4 590 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 CHSY1Q86X52 802 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 FBXO16Q8IX29 292 aaPredicted RBP4.26□□□□□ -1.73
ATRX-209ENST00000623242 RNF10Q8N5U6 811 aaKnown RBP4.26□□□□□ -1.73
ATRX-209ENST00000623242 SYT2Q8N9I0 419 aaPredicted RBP4.26□□□□□ -1.73
ATRX-209ENST00000623242 MCPH1Q8NEM0 835 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 KTI12Q96EK9 354 aaPredicted RBP4.26□□□□□ -1.73
ATRX-209ENST00000623242 PPP1R13BQ96KQ4 1090 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 MTMR9Q96QG7 549 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 TWNKQ96RR1 684 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 IFIH1Q9BYX4 1025 aaKnown RBP4.26□□□□□ -1.73
ATRX-209ENST00000623242 PLEKHA2Q9HB19 425 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 LZTFL1Q9NQ48 299 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 SAMSN1Q9NSI8 373 aaKnown RBP4.26□□□□□ -1.73
ATRX-209ENST00000623242 TBC1D7Q9P0N9 293 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 LCMT1Q9UIC8 334 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 GUCA1BQ9UMX6 200 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 WNT6Q9Y6F9 365 aa4.26□□□□□ -1.73
ATRX-209ENST00000623242 ARHGEF17Q96PE2 2063 aaPredicted RBP4.26□□□□□ -1.73
ATRX-209ENST00000623242 TBC1D3DA0A087WVF3 549 aa4.25□□□□□ -1.73
ATRX-209ENST00000623242 TBC1D3IA0A087WXS9 549 aa4.25□□□□□ -1.73
ATRX-209ENST00000623242 TBC1D3EA0A087X179 549 aa4.25□□□□□ -1.73
ATRX-209ENST00000623242 TBC1D3KA0A087X1G2 549 aa4.25□□□□□ -1.73
ATRX-209ENST00000623242 TBC1D3BA6NDS4 549 aa4.25□□□□□ -1.73
ATRX-209ENST00000623242 TBC1D3FA6NER0 549 aaPredicted RBP4.25□□□□□ -1.73
ATRX-209ENST00000623242 CCDC169A6NNP5 214 aa4.25□□□□□ -1.73
ATRX-209ENST00000623242 TBC1D3LB9A6J9 549 aa4.25□□□□□ -1.73
ATRX-209ENST00000623242 STX16-NPEPL1H3BU86 382 aa4.25□□□□□ -1.73
ATRX-209ENST00000623242 STX16O14662 325 aa4.25□□□□□ -1.73
ATRX-209ENST00000623242 NDC80O14777 642 aa4.25□□□□□ -1.73
ATRX-209ENST00000623242 GFPT2O94808 682 aa4.25□□□□□ -1.73
ATRX-209ENST00000623242 AGR2O95994 175 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms