RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 SKA1Q96BD8 255 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 SRPK1Q96SB4 655 aaKnown RBP14.26□□□□□ -0.13
CBWD3-217ENST00000621474 RIOK2Q9BVS4 552 aaKnown RBP14.26□□□□□ -0.13
CBWD3-217ENST00000621474 TEX101Q9BY14 249 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 GPR63Q9BZJ6 419 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 BPIFA1Q9NP55 256 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 KCTD5Q9NXV2 234 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 GOLGA6AQ9NYA3 693 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 PKD2L2Q9NZM6 624 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 HACD3Q9P035 362 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 NFKBIL1Q9UBC1 381 aaPredicted RBP14.26□□□□□ -0.13
CBWD3-217ENST00000621474 RNF14Q9UBS8 474 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 KCTD3Q9Y597 815 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 TMEM202A6NGA9 273 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 FADS2P1A8MWK0 482 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 GAPDHSO14556 408 aaPredicted RBP14.26□□□□□ -0.13
CBWD3-217ENST00000621474 TOR1BO14657 336 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 TM4SF5O14894 197 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 LDB2O43679 373 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 BUD23O43709 281 aaKnown RBP14.26□□□□□ -0.13
CBWD3-217ENST00000621474 TSHRP16473 764 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 TPH1P17752 444 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 TEAD1P28347 426 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 TNNT3P45378 269 aaPredicted RBP14.26□□□□□ -0.13
CBWD3-217ENST00000621474 DCDC1P59894 354 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 BASP1P80723 227 aaKnown RBP14.26□□□□□ -0.13
CBWD3-217ENST00000621474 KCNJ11Q14654 390 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 RAET1GQ6H3X3 334 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 C4orf22Q6V702 233 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 PARGQ86W56 976 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 HEATR4Q86WZ0 1026 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 DCP2Q8IU60 420 aaKnown RBP14.26□□□□□ -0.13
CBWD3-217ENST00000621474 BRSK1Q8TDC3 778 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 NETO1Q8TDF5 533 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 EIF2B3Q9NR50 452 aaKnown RBP14.26□□□□□ -0.13
CBWD3-217ENST00000621474 CNOT6Q9ULM6 557 aaKnown RBP14.26□□□□□ -0.13
CBWD3-217ENST00000621474 RGSL1A5PLK6 1076 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 PSMD3O43242 534 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 ZNF883P0CG24 379 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 MAGEA6P43360 314 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 RXRGP48443 463 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 ATXN3P54252 364 aaPredicted RBP14.25□□□□□ -0.13
CBWD3-217ENST00000621474 KIAA1024LP59773 190 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 CDK3Q00526 305 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 IL9RQ01113 521 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 GPS1Q13098 491 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 NFATC4Q14934 902 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 TAF1AQ15573 450 aaPredicted RBP14.25□□□□□ -0.13
CBWD3-217ENST00000621474 ZNF542PQ5EBM4 170 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 ANKRD22Q5VYY1 191 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 MACC1Q6ZN28 852 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 DBX2Q6ZNG2 339 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 KANSL1Q7Z3B3 1105 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 PTCD2Q8WV60 388 aaKnown RBP14.25□□□□□ -0.13
CBWD3-217ENST00000621474 CPT1BQ92523 772 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 TCEAL2Q9H3H9 227 aaPredicted RBP14.25□□□□□ -0.13
CBWD3-217ENST00000621474 FAM83DQ9H4H8 585 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 WDR26Q9H7D7 661 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 CASS4Q9NQ75 786 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 TM7SF3Q9NS93 570 aa14.25□□□□□ -0.13
CBWD3-217ENST00000621474 ZFC3H1O60293 1989 aaKnown RBP14.25□□□□□ -0.13
CBWD3-217ENST00000621474 E7EVH7 732 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 CCDC188H7C350 402 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 GPR39O43194 453 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 TMEM63AO94886 807 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 ECEL1O95672 775 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 FUCA1P04066 466 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 CSF2P04141 144 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 HOXC4P09017 264 aaPredicted RBP14.24□□□□□ -0.13
CBWD3-217ENST00000621474 MYCLP1P12525 358 aaPredicted RBP14.24□□□□□ -0.13
CBWD3-217ENST00000621474 CD59P13987 128 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 NME1P15531 152 aaKnown RBP14.24□□□□□ -0.13
CBWD3-217ENST00000621474 EPHA8P29322 1005 aaPredicted RBP14.24□□□□□ -0.13
CBWD3-217ENST00000621474 CA5AP35218 305 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 PAFAH1B1P43034 410 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 ZNF140P52738 457 aaPredicted RBP14.24□□□□□ -0.13
CBWD3-217ENST00000621474 THOP1P52888 689 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 ARHGAP8P85298 464 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 CDH17Q12864 832 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 BNIP3Q12983 259 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 ALS2CLQ60I27 953 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 ADAMTSL4Q6UY14 1074 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 MICALCLQ6ZW33 695 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 ZNF572Q7Z3I7 529 aaPredicted RBP14.24□□□□□ -0.13
CBWD3-217ENST00000621474 LINC00523Q86TU6 105 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 KLHL7Q8IXQ5 586 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 SPATA4Q8NEY3 305 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 SAP25Q8TEE9 199 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 GRK7Q8WTQ7 553 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 PDXPQ96GD0 296 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 COX14Q96I36 57 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 PLEKHG4BQ96PX9 1271 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 FGF22Q9HCT0 170 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 IL26Q9NPH9 171 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.24□□□□□ -0.13
CBWD3-217ENST00000621474 FEZ2Q9UHY8 353 aaPredicted RBP14.24□□□□□ -0.13
CBWD3-217ENST00000621474 TMPRSS11EQ9UL52 423 aa14.24□□□□□ -0.13
CBWD3-217ENST00000621474 ARHGEF17Q96PE2 2063 aaPredicted RBP14.24□□□□□ -0.13
CBWD3-217ENST00000621474 PCDHGA12O60330 932 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 TPSB2P20231 275 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms