RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 UPP1Q16831 310 aa20.36■□□□□ 0.85
NEK3-208ENST00000618534 SIRPB2Q5JXA9 342 aa20.36■□□□□ 0.85
NEK3-208ENST00000618534 SCD5Q86SK9 330 aa20.36■□□□□ 0.85
NEK3-208ENST00000618534 CPNE9Q8IYJ1 553 aa20.36■□□□□ 0.85
NEK3-208ENST00000618534 OFCC1Q8IZS5 231 aa20.36■□□□□ 0.85
NEK3-208ENST00000618534 ITFG2Q969R8 447 aa20.36■□□□□ 0.85
NEK3-208ENST00000618534 HMCESQ96FZ2 354 aa20.36■□□□□ 0.85
NEK3-208ENST00000618534 SDR39U1Q9NRG7 319 aaPredicted RBP20.36■□□□□ 0.85
NEK3-208ENST00000618534 EI24O14681 340 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 HAPLN1P10915 354 aaPredicted RBP20.35■□□□□ 0.85
NEK3-208ENST00000618534 GFAPP14136 432 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 RENBPP51606 427 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 SPRED1Q7Z699 444 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 BBS5Q8N3I7 341 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 SNRNP27Q8WVK2 155 aaKnown RBP20.35■□□□□ 0.85
NEK3-208ENST00000618534 SEPT8Q92599 483 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 SLC10A4Q96EP9 437 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 TBATAQ96M53 351 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 PKMYT1Q99640 499 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 PLGRKTQ9HBL7 147 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 GID8Q9NWU2 228 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 CHCHD3Q9NX63 227 aaKnown RBP20.35■□□□□ 0.85
NEK3-208ENST00000618534 PCDHA9Q9Y5H5 950 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 A0A1B0GTL3 188 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 INPP4BO15327 924 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 RASAL1O95294 804 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 MATN4O95460 622 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 MTHFD2P13995 350 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 LBPP18428 481 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 SOX11P35716 441 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 PTPRCAPQ14761 206 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 CYP51A1Q16850 503 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 PIK3R6Q5UE93 754 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 LYSMD3Q7Z3D4 306 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 IFNEQ86WN2 208 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 LRRC49Q8IUZ0 686 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 NMUR1Q9HB89 426 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 SLC52A3Q9NQ40 469 aa20.35■□□□□ 0.85
NEK3-208ENST00000618534 H3BMM5 538 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 CLOCKO15516 846 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 LDB2O43679 373 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 ATE1O95260 518 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 SLC2A3P11169 496 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 VARSP26640 1264 aaKnown RBP20.34■□□□□ 0.85
NEK3-208ENST00000618534 PMS2P3Q13401 168 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 C16orf72Q14CZ0 275 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 RPS6KA2Q15349 733 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 RABL3Q5HYI8 236 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 MARC1Q5VT66 337 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 ELMSAN1Q6PJG2 1045 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 RAB44Q7Z6P3 723 aaPredicted RBP20.34■□□□□ 0.85
NEK3-208ENST00000618534 PLEKHH3Q7Z736 793 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 GOLM1Q8NBJ4 401 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 TRPV3Q8NET8 790 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 FAM210AQ96ND0 272 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 ASB2Q96Q27 587 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 HIPK3Q9H422 1215 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 AGO3Q9H9G7 860 aaKnown RBP20.34■□□□□ 0.85
NEK3-208ENST00000618534 CXorf21Q9HAI6 301 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 UXTQ9UBK9 157 aaPredicted RBP20.34■□□□□ 0.85
NEK3-208ENST00000618534 ST3GAL5Q9UNP4 418 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 TTC3P53804 2025 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 ZNF701M0R085 212 aaPredicted RBP20.34■□□□□ 0.85
NEK3-208ENST00000618534 FOXD2O60548 495 aaPredicted RBP20.34■□□□□ 0.85
NEK3-208ENST00000618534 NCK1P16333 377 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 DIO3P55073 304 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 LDLRAD1Q5T700 205 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 BLOC1S3Q6QNY0 202 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 AGMOQ6ZNB7 445 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 METTL23Q86XA0 190 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 DNAJB14Q8TBM8 379 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 TMEM125Q96AQ2 219 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 ZNHIT2Q9UHR6 403 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 FADS3Q9Y5Q0 445 aa20.34■□□□□ 0.85
NEK3-208ENST00000618534 ZFC3H1O60293 1989 aaKnown RBP20.33■□□□□ 0.85
NEK3-208ENST00000618534 DNAH12Q6ZR08 3092 aa20.33■□□□□ 0.85
NEK3-208ENST00000618534 TNPO2O14787 897 aaKnown RBP20.33■□□□□ 0.85
NEK3-208ENST00000618534 B3GAT3O94766 335 aa20.33■□□□□ 0.85
NEK3-208ENST00000618534 ZNF37AP17032 561 aaPredicted RBP20.33■□□□□ 0.85
NEK3-208ENST00000618534 GSK3BP49841 420 aa20.33■□□□□ 0.85
NEK3-208ENST00000618534 ECT2LQ008S8 904 aa20.33■□□□□ 0.85
NEK3-208ENST00000618534 SEMA3AQ14563 771 aa20.33■□□□□ 0.85
NEK3-208ENST00000618534 TMTC4Q5T4D3 741 aa20.33■□□□□ 0.85
NEK3-208ENST00000618534 CROCCP3Q8IVE0 287 aa20.33■□□□□ 0.85
NEK3-208ENST00000618534 MIPOL1Q8TD10 442 aa20.33■□□□□ 0.85
NEK3-208ENST00000618534 VPS33AQ96AX1 596 aa20.33■□□□□ 0.85
NEK3-208ENST00000618534 SGIP1Q9BQI5 828 aa20.33■□□□□ 0.85
NEK3-208ENST00000618534 SOX17Q9H6I2 414 aaPredicted RBP20.33■□□□□ 0.85
NEK3-208ENST00000618534 GJB3O75712 270 aa20.33■□□□□ 0.84
NEK3-208ENST00000618534 GOT2P00505 430 aaKnown RBP20.33■□□□□ 0.84
NEK3-208ENST00000618534 GPIP06744 558 aa20.33■□□□□ 0.84
NEK3-208ENST00000618534 ATXN1LP0C7T5 689 aaKnown RBP20.33■□□□□ 0.84
NEK3-208ENST00000618534 MLLT6P55198 1093 aaPredicted RBP20.33■□□□□ 0.84
NEK3-208ENST00000618534 NFYCQ13952 458 aa20.33■□□□□ 0.84
NEK3-208ENST00000618534 FBXO48Q5FWF7 155 aa20.33■□□□□ 0.84
NEK3-208ENST00000618534 DCP1BQ8IZD4 617 aaKnown RBP20.33■□□□□ 0.84
NEK3-208ENST00000618534 PSMG2Q969U7 264 aa20.33■□□□□ 0.84
NEK3-208ENST00000618534 ATOH8Q96SQ7 321 aa20.33■□□□□ 0.84
NEK3-208ENST00000618534 SP110Q9HB58 689 aa20.33■□□□□ 0.84
NEK3-208ENST00000618534 CDH7Q9ULB5 785 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms