RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 TTC23Q5W5X9 447 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 ZNF544Q6NX49 715 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 SLC16A12Q6ZSM3 486 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 KCNMB4Q86W47 210 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 NT5DC4Q86YG4 428 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 SLC41A1Q8IVJ1 513 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 ADGRG5Q8IZF4 528 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 BEND7Q8N7W2 519 aaPredicted RBP10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 SPPL2BQ8TCT7 592 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 HDAC2Q92769 488 aaKnown RBP10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 PMEPA1Q969W9 287 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 GMIPQ9P107 970 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 NDUFAF1Q9Y375 327 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 CDK2AP1O14519 115 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 ACOX3O15254 700 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 SCO2O43819 266 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 ICAM1P05362 532 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 ATF4P18848 351 aaPredicted RBP10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 ARNTP27540 789 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 TGFBR1P36897 503 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 ZNF143P52747 638 aaPredicted RBP10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 CTF1Q16619 201 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 TAZQ16635 292 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 ZDHHC13Q8IUH4 622 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 GRPEL2Q8TAA5 225 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 SYTL5Q8TDW5 730 aaPredicted RBP10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 PIK3R3Q92569 461 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 VMP1Q96GC9 406 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 CDHR1Q96JP9 859 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 MYRFLQ96LU7 910 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 FCRL3Q96P31 734 aaPredicted RBP10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 FEM1AQ9BSK4 669 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 NUAK2Q9H093 628 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 C2orf40Q9H1Z8 148 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 SMURF2Q9HAU4 748 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 FKBP14Q9NWM8 211 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 GIMAP2Q9UG22 337 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 ADAM28Q9UKQ2 775 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 IPPQ9Y573 584 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 TRIM64BA6NI03 449 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 KCNK1O00180 336 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 RNF103O00237 685 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 ARHGEF9O43307 516 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 ALDH1A2O94788 518 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 PRKD3O94806 890 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 SEMA3DO95025 777 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 FADS2O95864 444 aaKnown RBP10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 ARSFP54793 590 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 CNTN2Q02246 1040 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 BST2Q10589 180 aaKnown RBP10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 NFE2Q16621 373 aaPredicted RBP10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 RABL3Q5HYI8 236 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 RBM48Q5RL73 367 aaKnown RBP10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 AGAP6Q5VW22 663 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 CNSTQ6PJW8 725 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 SPRED1Q7Z699 444 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 RPL3LQ92901 407 aaKnown RBP10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 CEP19Q96LK0 163 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 TEPSINQ96N21 525 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 AGAP4Q96P64 663 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 MAGEB5Q9BZ81 275 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 INTS10Q9NVR2 710 aaKnown RBP10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 MTMR10Q9NXD2 777 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 HS6ST1O60243 411 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 GPIP06744 558 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 FSHRP23945 695 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 AXLP30530 894 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 HK2P52789 917 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 GALK2Q01415 458 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 CDK10Q15131 360 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 TKFCQ3LXA3 575 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 TRIM60Q495X7 471 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 PXDC1Q5TGL8 231 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 SWSAP1Q6NVH7 229 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 C4orf19Q8IY42 314 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 LSMEM2Q8N112 164 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 LEMD2Q8NC56 503 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 MCOLN3Q8TDD5 553 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 SLC22A17Q8WUG5 538 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 ALOXE3Q9BYJ1 711 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 ZNF385DQ9H6B1 395 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 ZC4H2Q9NQZ6 224 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 MAT2BQ9NZL9 334 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 ACTR3BQ9P1U1 418 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 SUPT7LO94864 414 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 ASS1P00966 412 aaKnown RBP10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 CHRNA1P02708 482 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 MAGEA3P43357 314 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 BACE1P56817 501 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 C1QTNF8P60827 252 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 GRM1Q13255 1194 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 SEMA5AQ13591 1074 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 CSHL1Q14406 222 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 CRY1Q16526 586 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 HSDL1Q3SXM5 330 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 SPANXN3Q5MJ09 141 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 FLCNQ8NFG4 579 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 SLC38A10Q9HBR0 1119 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 MORF4L1Q9UBU8 362 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms