RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	ZC3H15	Q8WU90	426 aa	Known RBP	13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	BEGAIN	Q9BUH8	593 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	NXF3	Q9H4D5	531 aa	Known RBP	13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	ARMC7	Q9H6L4	198 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	SPON1	Q9HCB6	807 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	C1orf232	A0A0U1RR37	186 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	SMIM28	A0A1B0GU29	152 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130		A0A1W2PP18	115 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	DFFA	O00273	331 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	AZIN1	O14977	448 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	MATN3	O15232	486 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	CDK14	O94921	469 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	HOXD12	P35452	270 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	SH3BP2	P78314	561 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	LIPE	Q05469	1076 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	GRIK2	Q13002	908 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	NFYC	Q13952	458 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	ZNF846	Q147U1	533 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	OXA1L	Q15070	435 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	PLCL1	Q15111	1095 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	CRY1	Q16526	586 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	FXN	Q16595	210 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	ZNF789	Q5FWF6	425 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	GTF2IRD2B	Q6EKJ0	949 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	CHST15	Q7LFX5	561 aa	Predicted RBP	13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	ISCA2	Q86U28	154 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	GTF2IRD2	Q86UP8	949 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	FAM35A	Q86V20	835 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	ARHGAP12	Q8IWW6	846 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	TTC30B	Q8N4P2	665 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	MRO	Q9BYG7	248 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	R3HDML	Q9H3Y0	253 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	FAM32A	Q9Y421	112 aa	Known RBP	13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	TRIM17	Q9Y577	477 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	PPP2R3B	Q9Y5P8	575 aa		13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	OAS3	Q9Y6K5	1087 aa	Known RBP	13.72	□□□□□ -0.21
UBE2F-223	ENST00000612130	E2F6	O75461	281 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	KCNE1	P15382	129 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	TSPAN8	P19075	237 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	CHRM3	P20309	590 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	FUT4	P22083	530 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	HTR1E	P28566	365 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	CYP2C18	P33260	490 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	CHRNA4	P43681	627 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	TMED10	P49755	219 aa	Known RBP	13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	ALDH3A2	P51648	485 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	ITGAD	Q13349	1161 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	RCAN2	Q14206	197 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	GRB7	Q14451	532 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	RPS6KA2	Q15349	733 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	CYP2A13	Q16696	494 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	RAB41	Q5JT25	222 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	ARHGAP36	Q6ZRI8	547 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	LINC00299	Q6ZSB3	139 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	PROSER1	Q86XN7	944 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	PPTC7	Q8NI37	304 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	BPIFB1	Q8TDL5	484 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	TAMM41	Q96BW9	452 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	MRGPRX2	Q96LB1	330 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	ING2	Q9H160	280 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	SOX17	Q9H6I2	414 aa	Predicted RBP	13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	NEU3	Q9UQ49	428 aa		13.71	□□□□□ -0.21
UBE2F-223	ENST00000612130	COL4A4	P53420	1690 aa	Predicted RBP	13.71	□□□□□ -0.22
UBE2F-223	ENST00000612130	CLDN25	C9JDP6	229 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130		H0Y858	1186 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	MAFK	O60675	156 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	CNOT3	O75175	753 aa	Known RBP	13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	PMPCB	O75439	489 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	EED	O75530	441 aa	Known RBP	13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	DNAJB5	O75953	348 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	PAPSS2	O95340	614 aa	Predicted RBP	13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	HPR	P00739	348 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	ZNF286B	P0CG31	522 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	RXRG	P48443	463 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	KCNK10	P57789	538 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	GABARAPL2	P60520	117 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	BFSP2	Q13515	415 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	SKIV2L	Q15477	1246 aa	Known RBP	13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	GRIK4	Q16099	956 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	XKR4	Q5GH76	650 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	GPR158	Q5T848	1215 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	TMEM53	Q6P2H8	277 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	SPATA19	Q7Z5L4	167 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	CILP2	Q8IUL8	1156 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	CCDC138	Q96M89	665 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	ZNF641	Q96N77	438 aa	Predicted RBP	13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	RDH12	Q96NR8	316 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	MUS81	Q96NY9	551 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	WDR12	Q9GZL7	423 aa	Known RBP	13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	LHPP	Q9H008	270 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	ARNT2	Q9HBZ2	717 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	MID1IP1	Q9NPA3	183 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	TLR9	Q9NR96	1032 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	GPRC5D	Q9NZD1	345 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	POLG2	Q9UHN1	485 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	PCDHGA11	Q9Y5H2	935 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	CPQ	Q9Y646	472 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms