RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 PPP2CBP62714 309 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 RPS21P63220 83 aaKnown RBP8.85□□□□□ -0.99
SMAD4-217ENST00000611848 PPP2CAP67775 309 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 IFT88Q13099 833 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 ITIH4Q14624 930 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 SETMARQ53H47 684 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-217ENST00000611848 SLC45A4Q5BKX6 768 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 HP1BP3Q5SSJ5 553 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-217ENST00000611848 ERAP2Q6P179 960 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 SLC23A3Q6PIS1 610 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 HORMAD1Q86X24 394 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 CDKL3Q8IVW4 592 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-217ENST00000611848 SRRM1Q8IYB3 904 aaKnown RBP8.85□□□□□ -0.99
SMAD4-217ENST00000611848 OTUD6BQ8N6M0 293 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 PAF1Q8N7H5 531 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 FBXO36Q8NEA4 188 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 C1orf216Q8TAB5 229 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 ARRDC2Q8TBH0 407 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 DENND1AQ8TEH3 1009 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 HTR3CQ8WXA8 447 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 SGSM3Q96HU1 749 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 TEKT5Q96M29 485 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 NSMCE3Q96MG7 304 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 QKIQ96PU8 341 aaKnown RBP eCLIP8.85□□□□□ -0.992e-6■■■■□ 20.5
SMAD4-217ENST00000611848 NUSAP1Q9BXS6 441 aaKnown RBP8.85□□□□□ -0.99
SMAD4-217ENST00000611848 MIR1-1HGQ9H1L0 117 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 ACSS3Q9H6R3 686 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 KCNK9Q9NPC2 374 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 PSMC3IPQ9P2W1 217 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-217ENST00000611848 TBK1Q9UHD2 729 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 PHTF1Q9UMS5 762 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 DMTF1Q9Y222 760 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 TTLL3Q9Y4R7 772 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 PLXNA2O75051 1894 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 LRRK1Q38SD2 2015 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 A0A1W2PQU0 124 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 POC1B-GALNT4F8VUJ3 575 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 BCAT2O15382 392 aaPredicted RBP8.84□□□□□ -0.99
SMAD4-217ENST00000611848 KCNN4O15554 427 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 GCATO75600 419 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 CPP00450 1065 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 RBL1P28749 1068 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 RACK1P63244 317 aaKnown RBP8.84□□□□□ -0.99
SMAD4-217ENST00000611848 BASP1P80723 227 aaKnown RBP8.84□□□□□ -0.99
SMAD4-217ENST00000611848 DSC2Q02487 901 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 TRAF2Q12933 501 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 TMED2Q15363 201 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 SLC14A2Q15849 920 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 KLHL38Q2WGJ6 581 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 LACTB2Q53H82 288 aaPredicted RBP8.84□□□□□ -0.99
SMAD4-217ENST00000611848 TRIM61Q5EBN2 209 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 ARMC12Q5T9G4 340 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 ADGRD1Q6QNK2 874 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 PRR23CQ6ZRP0 262 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 ARHGEF18Q6ZSZ5 1173 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 C3orf62Q6ZUJ4 267 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 ZSWIM9Q86XI8 627 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 ANKMY2Q8IV38 441 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 PARP9Q8IXQ6 854 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 NDUFAF2Q8N183 169 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 CNTD1Q8N815 330 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 CCDC197Q8NCU1 140 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 CXorf40AQ8TE69 158 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 PDCD6IPQ8WUM4 868 aaKnown RBP8.84□□□□□ -0.99
SMAD4-217ENST00000611848 CABS1Q96KC9 395 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 MAGEB18Q96M61 343 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 AGAP3Q96P47 875 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 ORAI3Q9BRQ5 295 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 NSRP1Q9H0G5 558 aaKnown RBP8.84□□□□□ -0.99
SMAD4-217ENST00000611848 SLC25A51Q9H1U9 297 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 SSU72Q9NP77 194 aaKnown RBP8.84□□□□□ -0.99
SMAD4-217ENST00000611848 PARD6AQ9NPB6 346 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 PCDH12Q9NPG4 1184 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 TRHDEQ9UKU6 1024 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 SLC6A14Q9UN76 642 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 PCDHB9Q9Y5E1 797 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 PCDHGC4Q9Y5F7 938 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 RAI2Q9Y5P3 530 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 TEX264Q9Y6I9 313 aa8.84□□□□□ -0.99
SMAD4-217ENST00000611848 ASCC3Q8N3C0 2202 aaKnown RBP8.83□□□□□ -1
SMAD4-217ENST00000611848 FZD6O60353 706 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 SPAG6O75602 509 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 PGLSO95336 258 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 ASMTLO95671 621 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 VIMP08670 466 aaKnown RBP8.83□□□□□ -1
SMAD4-217ENST00000611848 SSTR1P30872 391 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 MAT2AP31153 395 aaKnown RBP8.83□□□□□ -1
SMAD4-217ENST00000611848 AFF3P51826 1226 aaKnown RBP8.83□□□□□ -1
SMAD4-217ENST00000611848 NIPAL4Q0D2K0 466 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 WASHC5Q12768 1159 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 LRRC14Q15048 493 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 TEAD4Q15561 434 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 CCDC6Q16204 474 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 ZNF284Q2VY69 593 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 BBS9Q3SYG4 887 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 TMEM52BQ4KMG9 183 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 TMEM259Q4ZIN3 620 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 IGDCC3Q8IVU1 814 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 PALM2Q8IXS6 379 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 C10orf67Q8IYJ2 551 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms