RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 CSH1P0DML2 217 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 CSH2P0DML3 217 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 PORP16435 677 aaPredicted RBP4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 GABRB1P18505 474 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 STX2P32856 288 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 SNX16P57768 344 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 ACSM2AQ08AH3 577 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 Q0VFX4 171 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 IRF3Q14653 427 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 TOMM20Q15388 145 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 ASTE1Q2TB18 679 aaPredicted RBP4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 SOWAHCQ53LP3 525 aaPredicted RBP4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 TDRD12Q587J7 1177 aaKnown RBP4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 ACSM2BQ68CK6 577 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 KIAA0930Q6ICG6 404 aaPredicted RBP4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 TAOK1Q7L7X3 1001 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 RNF168Q8IYW5 571 aaPredicted RBP4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 PELI3Q8N2H9 469 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 NEXN-AS1Q8NBZ9 246 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 ADAMTS14Q8WXS8 1223 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 ELMOD3Q96FG2 381 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 CAMK1GQ96NX5 476 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 ACOX2Q99424 681 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 SEPT5Q99719 369 aaPredicted RBP4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 SH3GL2Q99962 352 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 SLC25A33Q9BSK2 321 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 HAUS8Q9BT25 410 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 PPP1R3EQ9H7J1 279 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 CWC15Q9P013 229 aaKnown RBP4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 AGO1Q9UL18 857 aaKnown RBP4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 TTC7AQ9ULT0 858 aaPredicted RBP4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 ATXN2Q99700 1313 aaKnown RBP4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 GJB3O75712 270 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 GCH1P30793 250 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 ACTN2P35609 894 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 PCYT1AP49585 367 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 CAMPP49913 170 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 IRX6P78412 446 aaPredicted RBP4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 LRMPQ12912 555 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 IKQ13123 557 aaPredicted RBP4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 EFNB3Q15768 340 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 RAB41Q5JT25 222 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 EFHC1Q5JVL4 640 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 PLEKHS1Q5SXH7 462 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 LRIF1Q5T3J3 769 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 CACNA2D4Q7Z3S7 1137 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 TAGAPQ8N103 731 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 KXD1Q9BQD3 176 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 KCNN2Q9H2S1 579 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 PLK3Q9H4B4 646 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 SETD4Q9NVD3 440 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 WWOXQ9NZC7 414 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 OGFRQ9NZT2 677 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 SLC9A2Q9UBY0 812 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 FBXL17Q9UF56 701 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 NENFQ9UMX5 172 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 PCDHGB4Q9UN71 923 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 PCDHA7Q9UN72 937 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 TMEM5Q9Y2B1 443 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 RABGAP1Q9Y3P9 1069 aa4.32□□□□□ -1.72
SMCHD1-213ENST00000609587 A0A1W2PQ09 198 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 hDV102S1A0JD36 115 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 H3BQ06 376 aaPredicted RBP4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 KCNJ13O60928 360 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 NDUFS7O75251 213 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 DAB1O75553 588 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 GLUD1P00367 558 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 ALPLP05186 524 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 SRPRAP08240 638 aaKnown RBP4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 HOXA11P31270 313 aaPredicted RBP4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 HOXA13P31271 388 aaPredicted RBP4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 HOXC9P31274 260 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 PRCPP42785 496 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 GLUD2P49448 558 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 TAS2R40P59535 323 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 CRYZQ08257 329 aaKnown RBP4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 EPS8Q12929 822 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 GRIK2Q13002 908 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 PCGF3Q3KNV8 242 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 AMZ1Q400G9 498 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 PMS2CLQ68D20 193 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 KIAA1161Q6NSJ0 714 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 C8orf82Q6P1X6 216 aaPredicted RBP4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 SLC36A4Q6YBV0 504 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 MEPCEQ7L2J0 689 aaKnown RBP4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 FJX1Q86VR8 437 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 HACE1Q8IYU2 909 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 HJURPQ8NCD3 748 aaPredicted RBP4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 SAT2Q96F10 170 aaPredicted RBP4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 LYZL4Q96KX0 146 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 OR2A14Q96R47 310 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 SRSF8Q9BRL6 282 aaKnown RBP4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 C17orf75Q9HAS0 396 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 MMP25Q9NPA2 562 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 LTB4R2Q9NPC1 389 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 ACSS1Q9NUB1 689 aaPredicted RBP4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 SUCLA2Q9P2R7 463 aaPredicted RBP4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 CLIC4Q9Y696 253 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 NOTCH4Q99466 2003 aa4.31□□□□□ -1.72
SMCHD1-213ENST00000609587 LINC01553A4QN01 128 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms