RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ENPP5Q9UJA9 477 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 AGO2Q9UKV8 859 aaKnown RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 DNPEPQ9ULA0 475 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 NIP7Q9Y221 180 aaKnown RBP eCLIP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 VWA7Q9Y334 891 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 PCDHGB1Q9Y5G3 927 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CDY2AQ9Y6F7 541 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CDY1Q9Y6F8 540 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CICQ96RK0 1608 aaPredicted RBP4.09□□□□□ -1.76
HMGB1P50-201ENST00000605814 NUP98P52948 1817 aa4.09□□□□□ -1.76
HMGB1P50-201ENST00000605814 TAF1LQ8IZX4 1826 aa4.09□□□□□ -1.76
HMGB1P50-201ENST00000605814 A0A1B0GTW7 788 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 TCRBV9S1A1TA0A576 114 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 FAM170AA1A519 330 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 AQP12BA6NM10 295 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 C16orf96A6NNT2 1141 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 TRIM49D1C9J1S8 452 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 KBTBD13C9JR72 458 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 J3QRK9 145 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 PLOD2O00469 737 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 TRIM24O15164 1050 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 CHADO15335 359 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 PHGDHO43175 533 aaKnown RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 MTSS1O43312 755 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 ASNA1O43681 348 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 MRPS14O60783 128 aaKnown RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 MED24O75448 989 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 TOMM70O94826 608 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 SORBS2O94875 1100 aaKnown RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 IL18RAPO95256 599 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 TDP2O95551 362 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 NDST3O95803 873 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 PTTG1O95997 202 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 S100BP04271 92 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 LDHCP07864 332 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 MYL3P08590 195 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 SNHG28P0DPA3 235 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 PCNAP12004 261 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 CYP11B1P15538 503 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF182P17025 639 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 KCNA6P17658 529 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 XRCC1P18887 633 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 CCNCP24863 283 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 DNAJB1P25685 340 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 PIK3R1P27986 724 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 GSTM2P28161 218 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 CCND2P30279 289 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 SERPINB1P30740 379 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 RPL22P35268 128 aaKnown RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 COL18A1P39060 1754 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 OPRL1P41146 370 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 BTDP43251 543 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 NAMPTP43490 491 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 SERPINB10P48595 397 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 KPNA1P52294 538 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF132P52740 706 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 CDH15P55291 814 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 TPTEP56180 551 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 ABCE1P61221 599 aaKnown RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 ADARB1P78563 741 aaKnown RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 IFITM3Q01628 133 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 TAP1Q03518 808 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 GAD2Q05329 585 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 SPIRE1Q08AE8 756 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 TOP3AQ13472 1001 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 PDE1CQ14123 709 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 HIST2H2ACQ16777 129 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 KCTD19Q17RG1 926 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 C5orf22Q49AR2 442 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 FASTKD1Q53R41 847 aaKnown RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 PPP6R3Q5H9R7 873 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 CEP78Q5JTW2 689 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 RBM20Q5T481 1227 aaKnown RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 LIN9Q5TKA1 542 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 TNS2Q63HR2 1409 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 LMBRD2Q68DH5 695 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 TMEM26Q6ZUK4 368 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 KCTD8Q6ZWB6 473 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 KCPQ6ZWJ8 1503 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 C1orf186Q6ZWK4 172 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 TAS2R42Q7RTR8 314 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 LIMS2Q7Z4I7 341 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 POLNQ7Z5Q5 900 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 UBE2Q1Q7Z7E8 422 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 ADGRA1Q86SQ6 560 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 CATSPER3Q86XQ3 398 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 PHF13Q86YI8 300 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZC3H7AQ8IWR0 971 aaKnown RBP4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZFPM1Q8IX07 1006 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 CTAGE3PQ8IX95 158 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 AQP12AQ8IXF9 295 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 THNSL1Q8IYQ7 743 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 ADGRF2Q8IZF7 708 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 LGI2Q8N0V4 545 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 MYO1HQ8N1T3 1032 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 TMCO5AQ8N6Q1 288 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 NIPA2Q8N8Q9 360 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 FAM47BQ8NA70 645 aa4.08□□□□□ -1.76
HMGB1P50-201ENST00000605814 RNF169Q8NCN4 708 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms