RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	NIM1K	Q8IY84	436 aa		11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	DEFB106A	Q8N104	65 aa		11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CLEC4F	Q8N1N0	589 aa		11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TMEM86A	Q8N2M4	240 aa		11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	RNF148	Q8N7C7	305 aa		11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	OR7A2P	Q8NGA2	310 aa		11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	HMGCLL1	Q8TB92	370 aa		11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	JDP2	Q8WYK2	163 aa		11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	EMID1	Q96A84	441 aa	Predicted RBP	11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TMEM125	Q96AQ2	219 aa		11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	KIF12	Q96FN5	646 aa		11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CEP295NL	Q96MC4	621 aa		11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	MLPH	Q9BV36	600 aa	Predicted RBP	11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	MFSD1	Q9H3U5	465 aa		11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SIAE	Q9HAT2	523 aa		11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CHRAC1	Q9NRG0	131 aa		11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SEPT10	Q9P0V9	454 aa		11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	BAG5	Q9UL15	447 aa		11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TDRKH	Q9Y2W6	561 aa	Known RBP	11.73	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PLXNA1	Q9UIW2	1896 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SRCAP	Q6ZRS2	3230 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	FAM172BP	A6NC97	362 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CLDN24	A6NM45	220 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236		M0R3G1	203 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	FXYD1	O00168	92 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	MATN3	O15232	486 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	IDH3B	O43837	385 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	NUAK1	O60285	661 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	DPM1	O60762	260 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SCEL	O95171	688 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	C22orf31	O95567	290 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	NDST3	O95803	873 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TRAPPC2	P0DI81	140 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TRAPPC2B	P0DI82	140 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	KCNE1	P15382	129 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PTPRA	P18433	802 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	MSH3	P20585	1137 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	OGN	P20774	298 aa	Known RBP	11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TGM1	P22735	817 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CD68	P34810	354 aa	Predicted RBP	11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ADRA1A	P35348	466 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	RXRG	P48443	463 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CXCR3	P49682	368 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	GSK3B	P49841	420 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CDH15	P55291	814 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TAS2R39	P59534	338 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	DEFA1	P59665	94 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	DEFA3	P59666	94 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	LCP2	Q13094	533 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	MAD2L1	Q13257	205 aa	Predicted RBP	11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ATP1A4	Q13733	1029 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	KEAP1	Q14145	624 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	DLG2	Q15700	870 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PHKG1	Q16816	387 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SOWAHA	Q2M3V2	549 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	UGT3A2	Q3SY77	523 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	DCAF6	Q58WW2	860 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	FBXO47	Q5MNV8	452 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TREML2	Q5T2D2	321 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	KIAA0319	Q5VV43	1072 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	BTBD8	Q5XKL5	378 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	IQSEC1	Q6DN90	963 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	XAF1	Q6GPH4	301 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ACOT1	Q86TX2	421 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ITIH5	Q86UX2	942 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ARMC8	Q8IUR7	673 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SPART	Q8N0X7	666 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ELMOD1	Q8N336	334 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ZCCHC7	Q8N3Z6	543 aa	Known RBP	11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TMEM199	Q8N511	208 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	KIAA1958	Q8N8K9	716 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	APPL2	Q8NEU8	664 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	OR6B3	Q8NGW1	331 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SNX19	Q92543	992 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	FKBP10	Q96AY3	582 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	WNK4	Q96J92	1243 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PIWIL1	Q96J94	861 aa	Known RBP	11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	C8orf37	Q96NL8	207 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	NODAL	Q96S42	347 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	NACA2	Q9H009	215 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TRIT1	Q9H3H1	467 aa	Known RBP	11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CAB39L	Q9H9S4	337 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	LIN28A	Q9H9Z2	209 aa	Known RBP	11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	GLOD4	Q9HC38	313 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	MYOZ2	Q9NPC6	264 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SCN3B	Q9NY72	215 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	MAP10	Q9P2G4	905 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	POLG2	Q9UHN1	485 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TMEM98	Q9Y2Y6	226 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TESMIN	Q9Y4I5	508 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PCDHGA11	Q9Y5H2	935 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	COMMD10	Q9Y6G5	202 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PTPRF	P10586	1907 aa		11.72	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ASB14	A6NK59	587 aa		11.71	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	WASH4P	A8MWX3	477 aa		11.71	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ZNF99	A8MXY4	864 aa	Predicted RBP	11.71	□□□□□ -0.53
U2AF1L4-221	ENST00000601236		M0QYT0	321 aa		11.71	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PIR	O00625	290 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms