RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 MAP3K6O95382 1288 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 HLA-DQB2P05538 268 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 ITGA2BP08514 1039 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 GOLGA6DP0CG33 693 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 ZFXP17010 805 aaPredicted RBP15.75■□□□□ 0.11
VRK3-221ENST00000600284 SLC1A1P43005 524 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 STC1P52823 247 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 INHBCP55103 352 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 IFI35P80217 286 aaPredicted RBP15.75■□□□□ 0.11
VRK3-221ENST00000600284 NIPAL4Q0D2K0 466 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 IHHQ14623 411 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 TCEAL1Q15170 157 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 PTPRRQ15256 657 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 SLC9A4Q6AI14 798 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 CNGA4Q8IV77 575 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 PLD5Q8N7P1 536 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 EXD1Q8NHP7 514 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 TMEM159Q96B96 161 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 MAK16Q9BXY0 300 aaKnown RBP15.75■□□□□ 0.11
VRK3-221ENST00000600284 BRD8Q9H0E9 1235 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 PCDH9Q9HC56 1237 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 SPATS2LQ9NUQ6 558 aaKnown RBP15.75■□□□□ 0.11
VRK3-221ENST00000600284 GOLGA6AQ9NYA3 693 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 SSUH2Q9Y2M2 353 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 TTLL3Q9Y4R7 772 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 RNF215Q9Y6U7 377 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 C3orf70A6NLC5 250 aaPredicted RBP15.74■□□□□ 0.11
VRK3-221ENST00000600284 B4DGG1 531 aa15.74■□□□□ 0.11
VRK3-221ENST00000600284 PLD2O14939 933 aa15.74■□□□□ 0.11
VRK3-221ENST00000600284 CASC3O15234 703 aaKnown RBP15.74■□□□□ 0.11
VRK3-221ENST00000600284 TNFSF15O95150 251 aa15.74■□□□□ 0.11
VRK3-221ENST00000600284 SOD1P00441 154 aa15.74■□□□□ 0.11
VRK3-221ENST00000600284 JCHAINP01591 159 aa15.74■□□□□ 0.11
VRK3-221ENST00000600284 FGF1P05230 155 aa15.74■□□□□ 0.11
VRK3-221ENST00000600284 GNPDA1P46926 289 aa15.74■□□□□ 0.11
VRK3-221ENST00000600284 TMPRSS3P57727 454 aa15.74■□□□□ 0.11
VRK3-221ENST00000600284 ZFP36L1Q07352 338 aaKnown RBP15.74■□□□□ 0.11
VRK3-221ENST00000600284 CLPPQ16740 277 aaPredicted RBP15.74■□□□□ 0.11
VRK3-221ENST00000600284 SPRED1Q7Z699 444 aa15.74■□□□□ 0.11
VRK3-221ENST00000600284 FBXO39Q8N4B4 442 aa15.74■□□□□ 0.11
VRK3-221ENST00000600284 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.74■□□□□ 0.11
VRK3-221ENST00000600284 ZDHHC1Q8WTX9 485 aa15.74■□□□□ 0.11
VRK3-221ENST00000600284 BBC3Q96PG8 261 aaPredicted RBP15.74■□□□□ 0.11
VRK3-221ENST00000600284 CDH19Q9H159 772 aa15.74■□□□□ 0.11
VRK3-221ENST00000600284 SPTLC3Q9NUV7 552 aa15.74■□□□□ 0.11
VRK3-221ENST00000600284 DDX56Q9NY93 547 aaKnown RBP15.74■□□□□ 0.11
VRK3-221ENST00000600284 TAAR2Q9P1P5 351 aa15.74■□□□□ 0.11
VRK3-221ENST00000600284 PCDHGA7Q9Y5G6 932 aa15.74■□□□□ 0.11
VRK3-221ENST00000600284 RGSL1A5PLK6 1076 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 EIF4E1BA6NMX2 242 aaKnown RBP15.73■□□□□ 0.11
VRK3-221ENST00000600284 ANKRD66B4E2M5 251 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 AKR1B15C9JRZ8 316 aaPredicted RBP15.73■□□□□ 0.11
VRK3-221ENST00000600284 APOL1O14791 398 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 CLDN7O95471 211 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 ADCY8P40145 1251 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 B4GALNT1Q00973 533 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 CTBSQ01459 385 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 LRP8Q14114 963 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 NR1D2Q14995 579 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 PDK1Q15118 436 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 FOXR1Q6PIV2 292 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 RFLNAQ6ZTI6 216 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 RAB11FIP2Q7L804 512 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 ZNF438Q7Z4V0 828 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 B3GNT8Q7Z7M8 397 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 RHOT1Q8IXI2 618 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.73■□□□□ 0.11
VRK3-221ENST00000600284 CNTD1Q8N815 330 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 Q8N9G6 341 aaPredicted RBP15.73■□□□□ 0.11
VRK3-221ENST00000600284 LPCAT1Q8NF37 534 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 CCHCR1Q8TD31 782 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 SCAMP4Q969E2 229 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 NAF1Q96HR8 494 aaKnown RBP15.73■□□□□ 0.11
VRK3-221ENST00000600284 COX14Q96I36 57 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 MLPHQ9BV36 600 aaPredicted RBP15.73■□□□□ 0.11
VRK3-221ENST00000600284 ADGRE3Q9BY15 652 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 EPB41L5Q9HCM4 733 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 CD84Q9UIB8 345 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 HEY1Q9Y5J3 304 aa15.73■□□□□ 0.11
VRK3-221ENST00000600284 IGSF10Q6WRI0 2623 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 PTPRQQ9UMZ3 2332 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 A0A0U1RQS6 177 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 RHPN2P1A8MT19 583 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 KCNK1O00180 336 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 PPP1R12AO14974 1030 aaPredicted RBP15.72■□□□□ 0.11
VRK3-221ENST00000600284 ATXN7O15265 892 aaPredicted RBP15.72■□□□□ 0.11
VRK3-221ENST00000600284 KLK10O43240 276 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 MMP2P08253 660 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 UGT1A5P35504 534 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 CD86P42081 329 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 GPR3P46089 330 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 POLD2P49005 469 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 CXADRP78310 365 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 TBX2Q13207 712 aaPredicted RBP15.72■□□□□ 0.11
VRK3-221ENST00000600284 COL9A2Q14055 689 aaPredicted RBP15.72■□□□□ 0.11
VRK3-221ENST00000600284 PYCR3Q53H96 274 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 ODF2Q5BJF6 829 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 BZW1Q7L1Q6 419 aaKnown RBP15.72■□□□□ 0.11
VRK3-221ENST00000600284 SFTPA2Q8IWL1 248 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 SNRNP27Q8WVK2 155 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms